RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 EXOGQ9Y2C4 368 aaKnown RBP14.7□□□□□ -0.06
COL7A1-202ENST00000422991 RAI1Q7Z5J4 1906 aaPredicted RBP14.7□□□□□ -0.06
COL7A1-202ENST00000422991 PRR32B1ATL7 298 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 DBHP09172 617 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 OR2T7P0C7T2 308 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 PRF1P14222 555 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 SSTR2P30874 369 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 OPRL1P41146 370 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 TLE4Q04727 773 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 HGFACQ04756 655 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 RAB40BQ12829 278 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 RSPO1Q2MKA7 263 aaPredicted RBP14.69□□□□□ -0.06
COL7A1-202ENST00000422991 SLC22A25Q6T423 547 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 SPATC1Q76KD6 591 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 RHOUQ7L0Q8 258 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 OR10H4Q8NGA5 316 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 OR2T27Q8NH04 317 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 ASB17Q8WXJ9 295 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 TBX5Q99593 518 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 COPS4Q9BT78 406 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 Q9H521 79 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 CENPMQ9NSP4 180 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 PLCXD1Q9NUJ7 323 aa14.69□□□□□ -0.06
COL7A1-202ENST00000422991 A0A1W2PQL4 384 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF670-ZNF695F2Z2N8 137 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 PHYHO14832 338 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 DENRO43583 198 aaKnown RBP14.68□□□□□ -0.06
COL7A1-202ENST00000422991 ICMTO60725 284 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 CCNOP22674 350 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 PCSK6P29122 969 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 OTX1P32242 354 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-202ENST00000422991 WNT5AP41221 380 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 CXCR4P61073 352 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 ACTC1P68032 377 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 ACTA1P68133 377 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 ROM1Q03395 351 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 KLHL22Q53GT1 634 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 C6orf141Q5SZD1 244 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 SSX6Q7RTT6 188 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 LILRB1Q8NHL6 650 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-202ENST00000422991 NEUROG1Q92886 237 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 DCLRE1CQ96SD1 692 aaKnown RBP14.68□□□□□ -0.06
COL7A1-202ENST00000422991 RHNO1Q9BSD3 238 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 TTTY10Q9BZA0 68 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 CLEC4MQ9H2X3 399 aaPredicted RBP14.68□□□□□ -0.06
COL7A1-202ENST00000422991 PCDHGB1Q9Y5G3 927 aa14.68□□□□□ -0.06
COL7A1-202ENST00000422991 XPNPEP2O43895 674 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 FAM20BO75063 409 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 FADS2O95864 444 aaKnown RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 IGHA1P01876 353 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 ACSM4P0C7M7 580 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 NR4A1P22736 598 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 GRB2P62993 217 aaKnown RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 NKX6-1P78426 367 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 GALK2Q01415 458 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 TAF13Q15543 124 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF672Q499Z4 452 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 KRT80Q6KB66 452 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 KCTD18Q6PI47 426 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF322Q6U7Q0 402 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 LRRN1Q6UXK5 716 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 TMEM200AQ86VY9 491 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF101Q8IZC7 436 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 NUP37Q8NFH4 326 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 OR52I1Q8NGK6 324 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 IPCEF1Q8WWN9 437 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 SPTSSAQ969W0 71 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 OR8B4Q96RC9 309 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 FGF20Q9NP95 211 aaPredicted RBP14.67□□□□□ -0.06
COL7A1-202ENST00000422991 POU2F3Q9UKI9 436 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 MYRFQ9Y2G1 1151 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 PCDHGB5Q9Y5G0 923 aa14.67□□□□□ -0.06
COL7A1-202ENST00000422991 IRGMA1A4Y4 181 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 F5H5K5 113 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 M0R135 149 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 SLC1A7O00341 560 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 SMPD2O60906 423 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 ABHD16AO95870 558 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 H2BFMP0C1H6 154 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 PIPP12273 146 aaPredicted RBP14.66□□□□□ -0.06
COL7A1-202ENST00000422991 TPTEP56180 551 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF85Q03923 595 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 SNTB2Q13425 540 aaKnown RBP14.66□□□□□ -0.06
COL7A1-202ENST00000422991 DEGS2Q6QHC5 323 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 RFPL4BQ6ZWI9 263 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 KRT77Q7Z794 578 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF679Q8IYX0 411 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 ACBD7Q8N6N7 88 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 BPIFB6Q8NFQ5 453 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 AKAP1Q92667 903 aaKnown RBP eCLIP14.66□□□□□ -0.06
COL7A1-202ENST00000422991 GGHQ92820 318 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF799Q96GE5 643 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 C4orf45Q96LM5 186 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 KCNJ15Q99712 375 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 JAM3Q9BX67 310 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 SLCO1C1Q9NYB5 712 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 CNOT2Q9NZN8 540 aaKnown RBP14.66□□□□□ -0.06
COL7A1-202ENST00000422991 PSORS1C1Q9UIG5 152 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 GRIP1Q9Y3R0 1128 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 SPEF1Q9Y4P9 236 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms