RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 F5H5K5 113 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 M0R135 149 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 DCTN6O00399 190 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SLC17A2O00624 439 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SMAD9O15198 467 aaKnown RBP7.44□□□□□ -1.22
USP54-203ENST00000418501 RBBP9O75884 186 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 F10P00742 488 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 IL7P13232 177 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 CPN1P15169 458 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 RIN1Q13671 783 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ZNF169Q14929 603 aaPredicted RBP7.44□□□□□ -1.22
USP54-203ENST00000418501 INPP5JQ15735 1006 aaPredicted RBP7.44□□□□□ -1.22
USP54-203ENST00000418501 HES5Q5TA89 166 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ZNF468Q5VIY5 522 aaPredicted RBP7.44□□□□□ -1.22
USP54-203ENST00000418501 KRT74Q7RTS7 529 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 STEAP2Q8NFT2 490 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 OR1F12Q8NHA8 337 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ITPKCQ96DU7 683 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SCMH1Q96GD3 660 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ZNF799Q96GE5 643 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 GMPPAQ96IJ6 420 aaPredicted RBP7.44□□□□□ -1.22
USP54-203ENST00000418501 FOXN4Q96NZ1 517 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 DEFB127Q9H1M4 99 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 CALHM2Q9HA72 323 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 TMEM38BQ9NVV0 291 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 RAB22AQ9UL26 194 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 HRH3Q9Y5N1 445 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 IGKV3D-15A0A087WSY6 115 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 CIB4A0PJX0 185 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 FIGNL2A6NMB9 653 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 EFNA2O43921 213 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ABHD16AO95870 558 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 CSF1P09603 554 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ZNF133P52736 654 aaPredicted RBP7.44□□□□□ -1.22
USP54-203ENST00000418501 CASP6P55212 293 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 OXA1LQ15070 435 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SSX8Q7RTT4 187 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 FGD2Q7Z6J4 655 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ADGRE4PQ86SQ3 457 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ZNF101Q8IZC7 436 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 OR1M1Q8NGA1 313 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SYNPRQ8TBG9 265 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 NEURL2Q9BR09 285 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SRRQ9GZT4 340 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SLC6A15Q9H2J7 730 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 SCPEP1Q9HB40 452 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 ASCL3Q9NQ33 180 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 NPAP1Q9NZP6 1156 aa7.44□□□□□ -1.22
USP54-203ENST00000418501 PCDHGA9Q9Y5G4 932 aaKnown RBP7.44□□□□□ -1.22
USP54-203ENST00000418501 TRBV5-7A0A0A0MS05 114 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 OR14I1A6ND48 311 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 DHRS7CA6NNS2 312 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 SULT1C2O00338 296 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CHRM2P08172 466 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 COX5BP10606 129 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 STARP49675 285 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 TNFSF10P50591 281 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CEACAM16Q2WEN9 425 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 KCNG3Q8TAE7 436 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 SCGB3A2Q96PL1 93 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 THAP7Q9BT49 309 aaPredicted RBP7.43□□□□□ -1.22
USP54-203ENST00000418501 SLC25A18Q9H1K4 315 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 IGHV3-15A0A0B4J1V0 119 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 AHRRA9YTQ3 701 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 P2RY10O00398 339 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CTDSPLO15194 276 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 SC5DO75845 299 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 WNT11O96014 354 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 GSTT2P0CG29 244 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 TGFBR1P36897 503 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 MZT1Q08AG7 82 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 GFOD2Q3B7J2 385 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 KRTCAP3Q53RY4 240 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 LGALS14Q8TCE9 139 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 RPS4Y2Q8TD47 263 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 HTRA1Q92743 480 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 PTX4Q96A99 478 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 MESP1Q9BRJ9 268 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 ZNF416Q9BWM5 594 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CRLF2Q9HC73 371 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 GPR35Q9HC97 309 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CHD7Q9P2D1 2997 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 A0A0U1RQV5 110 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 LINC00854A0A1B0GVQ3 168 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 AQP7O14520 342 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 NKX2-8O15522 239 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 ZNF780AO75290 641 aaPredicted RBP7.43□□□□□ -1.22
USP54-203ENST00000418501 NAT1P18440 290 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 RAB6AP20340 208 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CTSSP25774 331 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CBX5P45973 191 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 BCAP31P51572 246 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 GFRA1P56159 465 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 B3GALT5-AS1P59052 145 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 FOXC1Q12948 553 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 ETFDHQ16134 617 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 C3P1Q6ZMU1 363 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 CSNK2A3Q8NEV1 391 aa7.43□□□□□ -1.22
USP54-203ENST00000418501 SMAP2Q8WU79 429 aaPredicted RBP7.43□□□□□ -1.22
USP54-203ENST00000418501 FAM3DQ96BQ1 224 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms