RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 SCN3BQ9NY72 215 aa7□□□□□ -1.29
MDC1-203ENST00000417033 CNOT2Q9NZN8 540 aaKnown RBP7□□□□□ -1.29
MDC1-203ENST00000417033 LAMP5Q9UJQ1 280 aa7□□□□□ -1.29
MDC1-203ENST00000417033 IKZF2Q9UKS7 526 aa7□□□□□ -1.29
MDC1-203ENST00000417033 DIMT1Q9UNQ2 313 aaKnown RBP7□□□□□ -1.29
MDC1-203ENST00000417033 AMDHD2Q9Y303 409 aa7□□□□□ -1.29
MDC1-203ENST00000417033 TPRKBQ9Y3C4 175 aa7□□□□□ -1.29
MDC1-203ENST00000417033 GRIP1Q9Y3R0 1128 aa7□□□□□ -1.29
MDC1-203ENST00000417033 TIMM10BQ9Y5J6 103 aa7□□□□□ -1.29
MDC1-203ENST00000417033 PRRC2CQ9Y520 2896 aaKnown RBP6.99□□□□□ -1.29
MDC1-203ENST00000417033 CADP27708 2225 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 DPRXA6NFQ7 191 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 TRIM64A6NGJ6 449 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 SNTNA6NMZ2 147 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 PRSS44E7EML9 344 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 RGS10O43665 173 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 PNPP00491 289 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 IGKV3-15P01624 115 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 IGLV1-44P01699 117 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 LCKP06239 509 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 IGFBP2P18065 325 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 EEF1B2P24534 225 aaKnown RBP6.99□□□□□ -1.29
MDC1-203ENST00000417033 COL8A1P27658 744 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 WNT5AP41221 380 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 PRKXP51817 358 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 PCBD1P61457 104 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 SORDQ00796 357 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 KRTAP27-1Q3LI81 207 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 KCTD21Q4G0X4 260 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 KLHL22Q53GT1 634 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 TMEM53Q6P2H8 277 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 ZFP41Q8N8Y5 198 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 ZNF485Q8NCK3 441 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 GJC3Q8NFK1 279 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 OR1F12Q8NHA8 337 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 SPRYD4Q8WW59 207 aaPredicted RBP6.99□□□□□ -1.29
MDC1-203ENST00000417033 PPP1R14AQ96A00 147 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 POM121L2Q96KW2 1035 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 C4orf36Q96KX1 117 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 OR5M11Q96RB7 305 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 JAM3Q9BX67 310 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 HDHD5Q9BXW7 423 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 CCDC90BQ9GZT6 254 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 KCNN2Q9H2S1 579 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 OR51B6Q9H340 312 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 POFUT1Q9H488 388 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 ZNF696Q9H7X3 374 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 ELOVL3Q9HB03 270 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 DDX28Q9NUL7 540 aaKnown RBP6.99□□□□□ -1.29
MDC1-203ENST00000417033 ACOXLQ9NUZ1 547 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 CRIM1Q9NZV1 1036 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 CRNNQ9UBG3 495 aaPredicted RBP6.99□□□□□ -1.29
MDC1-203ENST00000417033 LRP12Q9Y561 859 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 RELNP78509 3460 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 USP9XQ93008 2570 aaPredicted RBP6.99□□□□□ -1.29
MDC1-203ENST00000417033 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
MDC1-203ENST00000417033 IGHV2OR16-5A0A0B4J2B6 119 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.98□□□□□ -1.29
MDC1-203ENST00000417033 C5orf49A4QMS7 147 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 TUBAL3A6NHL2 446 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 DEFB108AA8MXU0 73 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ZNF878C9JN71 531 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ATP6V1G2-DDX39BF2Z307 99 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 F5H5K5 113 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 J3QLW9 94 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 SRSF10O75494 262 aaKnown RBP6.98□□□□□ -1.29
MDC1-203ENST00000417033 RPP14O95059 124 aaKnown RBP6.98□□□□□ -1.29
MDC1-203ENST00000417033 PLAUP00749 431 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 SERPINA5P05154 406 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 RPSAP08865 295 aaKnown RBP6.98□□□□□ -1.29
MDC1-203ENST00000417033 H2BFMP0C1H6 154 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ACSM4P0C7M7 580 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ZNF19P17023 458 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 CCNOP22674 350 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 STOMP27105 288 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 DCKP27707 260 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 LOXP28300 417 aaPredicted RBP6.98□□□□□ -1.29
MDC1-203ENST00000417033 ARR3P36575 388 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 GTF2A1P52655 376 aaPredicted RBP6.98□□□□□ -1.29
MDC1-203ENST00000417033 GABARAPL2P60520 117 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ERVS71-1P61550 626 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 CSNK2BP67870 215 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ACTC1P68032 377 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ACTA1P68133 377 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 GALK2Q01415 458 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 NAAAQ02083 359 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ROM1Q03395 351 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 GALEQ14376 348 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 MSMPQ1L6U9 139 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 CDONQ4KMG0 1287 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ZNF787Q6DD87 383 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 HIST2H2BCQ6DN03 193 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 ZNF773Q6PK81 442 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 MEX3BQ6ZN04 569 aaKnown RBP6.98□□□□□ -1.29
MDC1-203ENST00000417033 RFPL4BQ6ZWI9 263 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 PRSS48Q7RTY5 328 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 KRT77Q7Z794 578 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 SYT9Q86SS6 491 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 P2RY8Q86VZ1 359 aa6.98□□□□□ -1.29
MDC1-203ENST00000417033 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms