RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CMTM3Q96MX0 182 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 MOB1AQ9H8S9 216 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 BRD7Q9NPI1 651 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 NUFIP1Q9UHK0 495 aaKnown RBP13.19□□□□□ -0.3
CCT4-201ENST00000394440 DHDHQ9UQ10 334 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 LIPGQ9Y5X9 500 aa13.19□□□□□ -0.3
CCT4-201ENST00000394440 ZNF891A8MT65 544 aaPredicted RBP13.18□□□□□ -0.3
CCT4-201ENST00000394440 ZNF84P51523 738 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 HES5Q5TA89 166 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 RIPPLY2Q5TAB7 128 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 MEIOBQ8N635 442 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 ABTB1Q969K4 478 aaPredicted RBP13.18□□□□□ -0.3
CCT4-201ENST00000394440 RBM24Q9BX46 236 aaKnown RBP13.18□□□□□ -0.3
CCT4-201ENST00000394440 ZDHHC11Q9H8X9 412 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 CEACAM4O75871 244 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 ACTL6AO96019 429 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 ACSM4P0C7M7 580 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 IGFBP3P17936 291 aaPredicted RBP13.18□□□□□ -0.3
CCT4-201ENST00000394440 CTSSP25774 331 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 GUCA1AP43080 201 aaPredicted RBP13.18□□□□□ -0.3
CCT4-201ENST00000394440 SLC10A1Q14973 349 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 C1QTNF12Q5T7M4 302 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 FAM27BQ5VT28 67 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 LINGO2Q7L985 606 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 MRI1Q9BV20 369 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 PBOV1Q9GZY1 135 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 PAQR5Q9NXK6 330 aaPredicted RBP13.18□□□□□ -0.3
CCT4-201ENST00000394440 FOXJ3Q9UPW0 622 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 SPTBN2O15020 2390 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
CCT4-201ENST00000394440 A0A0G2JMP0 313 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 A0A0X1KG70 313 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 MAS1P04201 325 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 SRYQ05066 204 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 GDPD3Q7L5L3 318 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 Q8N402 240 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 DNAAF1Q8NEP3 725 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 OR4M2Q8NGB6 313 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 CPT1CQ8TCG5 803 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 ASPMQ8IZT6 3477 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 ZFHX4Q86UP3 3567 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 TNRC6AQ8NDV7 1962 aaKnown RBP13.17□□□□□ -0.3
CCT4-201ENST00000394440 ACOT7O00154 380 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 DOK2O60496 412 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 CD2P06729 351 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 CALCBP10092 127 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 CD37P11049 281 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 HSD11B1P28845 292 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 TALDO1P37837 337 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 SCN1BQ07699 218 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 ASAH1Q13510 395 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 GPR137CQ8N3F9 429 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 GJC3Q8NFK1 279 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 ALKBH3Q96Q83 286 aaPredicted RBP13.17□□□□□ -0.3
CCT4-201ENST00000394440 LIN7BQ9HAP6 207 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 CRLF2Q9HC73 371 aa13.17□□□□□ -0.3
CCT4-201ENST00000394440 FUOMA2VDF0 154 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 ANXA2P2A6NMY6 339 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 P2RY10O00398 339 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 ANXA2P07355 339 aaKnown RBP13.16□□□□□ -0.3
CCT4-201ENST00000394440 SPNP16150 400 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 GRB2P62993 217 aaKnown RBP13.16□□□□□ -0.3
CCT4-201ENST00000394440 UBE2NLQ5JXB2 153 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 ZNF671Q8TAW3 534 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 SLC25A38Q96DW6 304 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 TMEM38BQ9NVV0 291 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 OR5V1Q9UGF6 321 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 ARHGAP21Q5T5U3 1957 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 EFSO43281 561 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 SSX4O60224 188 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 ANOS1P23352 680 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
CCT4-201ENST00000394440 PITPNBP48739 271 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 PRKXP51817 358 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 CLDN12P56749 244 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 CCDC92Q53HC0 331 aaPredicted RBP13.16□□□□□ -0.3
CCT4-201ENST00000394440 PRSS45Q7RTY3 260 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 ITFG2Q969R8 447 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 FBXO17Q96EF6 278 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 RNF122Q9H9V4 155 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 KCNMB2Q9Y691 235 aa13.16□□□□□ -0.3
CCT4-201ENST00000394440 A0A1B0GTI1 187 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 BCAP31P51572 246 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 SCAND1P57086 179 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 ZNF121P58317 390 aaPredicted RBP13.15□□□□□ -0.3
CCT4-201ENST00000394440 DEFB109BQ30KR1 87 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 FAM166AQ6J272 317 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 PYHIN1Q6K0P9 492 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 LRRC18Q8N456 261 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 OR13C3Q8NGS6 347 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 FNDC9Q8TBE3 224 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 WACQ9BTA9 647 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 BCO1Q9HAY6 547 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 TAS2R4Q9NYW5 299 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 MCTS1Q9ULC4 181 aaKnown RBP13.15□□□□□ -0.3
CCT4-201ENST00000394440 RTTNQ86VV8 2226 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 A0A1B0GVC2 190 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 A6NIN4 97 aa13.15□□□□□ -0.3
CCT4-201ENST00000394440 LMX1BO60663 402 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms