RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 HOXC4P09017 264 aaPredicted RBP3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 CTRB1P17538 263 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 CSNK2A2P19784 350 aaPredicted RBP3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 DTYMKP23919 212 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 PPOXP50336 477 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 CLDN8P56748 225 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 UBE2MP61081 183 aaKnown RBP3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 SEMG2Q02383 582 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 ZNF33AQ06730 810 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 HADHQ16836 314 aaKnown RBP3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 KLHL40Q2TBA0 621 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 Q6P435 159 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 FBXW12Q6X9E4 464 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 CYB561D1Q8N8Q1 229 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 PDXPQ96GD0 296 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 NDFIP1Q9BT67 221 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 CALN1Q9BXU9 219 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 EDA2RQ9HAV5 297 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 HMG20AQ9NP66 347 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 ACP6Q9NPH0 428 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 MCUBQ9NWR8 336 aa3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 ZNF282Q9UDV7 671 aaPredicted RBP3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 RCL1Q9Y2P8 373 aaKnown RBP3.47□□□□□ -1.85
RNU6-40P-201ENST00000384254 MROH7-TTC4A0A0A0MT08 1334 aa3.46□□□□□ -1.85
RNU6-40P-201ENST00000384254 PHLPP2Q6ZVD8 1323 aa3.46□□□□□ -1.85
RNU6-40P-201ENST00000384254 IGLV1-50A0A075B6I6 118 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 IGLV1-36A0A0B4J1U3 117 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 PLPP1O14494 284 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 XRCC2O43543 280 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 SNAI2O43623 268 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 IGHV1-8P0DP01 117 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 PGAM1P18669 254 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 ATF6P18850 670 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 AZU1P20160 251 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 RAB4AP20338 218 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 MAGP20916 626 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 CD82P27701 267 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 SSTR5P35346 364 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 CLDN18P56856 261 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 IRF8Q02556 426 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 PON2Q15165 354 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 FAM78AQ5JUQ0 283 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 ZFP2Q6ZN57 461 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 HORMAD1Q86X24 394 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 MYOCDQ8IZQ8 938 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 VKORC1L1Q8N0U8 176 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 PGAM4Q8N0Y7 254 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 OR56A4Q8NGH8 313 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 OR5W2Q8NH69 310 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 ZNF681Q96N22 645 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 CAMK2N2Q96S95 79 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 ZNF382Q96SR6 550 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 FOXC2Q99958 501 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 IL22Q9GZX6 179 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 SAV1Q9H4B6 383 aaPredicted RBP3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 RGCCQ9H4X1 137 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 PEF1Q9UBV8 284 aaKnown RBP3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 ZNF222Q9UK12 451 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 PSG11Q9UQ72 335 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 HYOU1Q9Y4L1 999 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 CAMTA1Q9Y6Y1 1673 aa3.46□□□□□ -1.86
RNU6-40P-201ENST00000384254 COL22A1Q8NFW1 1626 aaPredicted RBP3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 IGHV5-10-1A0A0J9YXX1 117 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 NCBP2LA6PVI3 153 aaKnown RBP3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 TLX1NBP0CAT3 122 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 MSR1P21757 451 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 GPR1P46091 355 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 RGS19P49795 217 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 BCAP31P51572 246 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 CDKN2DP55273 166 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 RCAN2Q14206 197 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 ZNF266Q14584 549 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 HIKESHIQ53FT3 197 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 TCEAL5Q5H9L2 206 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 ADNP2Q6IQ32 1131 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 NANOGP8Q6NSW7 305 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 SNX20Q7Z614 316 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 VTCN1Q7Z7D3 282 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 CALHM1Q8IU99 346 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 SAXO1Q8IYX7 474 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 COX18Q8N8Q8 333 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 PROKR2Q8NFJ6 384 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 OR11H7Q8NGC8 314 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 TCEAL3Q969E4 200 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 APH1AQ96BI3 265 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 STARD4Q96DR4 205 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 NRBF2Q96F24 287 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 CERS2Q96G23 380 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 ZNF285Q96NJ3 590 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 TIMM17AQ99595 171 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 C8orf33Q9H7E9 229 aaPredicted RBP3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 DDX19BQ9UMR2 479 aa3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 YARS2Q9Y2Z4 477 aaKnown RBP3.45□□□□□ -1.86
RNU6-40P-201ENST00000384254 LRP4O75096 1905 aa3.44□□□□□ -1.86
RNU6-40P-201ENST00000384254 NACAE9PAV3 2078 aa3.44□□□□□ -1.86
RNU6-40P-201ENST00000384254 IGKV6D-21A0A0A0MT36 114 aa3.44□□□□□ -1.86
RNU6-40P-201ENST00000384254 TRAV19A0A0A6YYK7 116 aa3.44□□□□□ -1.86
RNU6-40P-201ENST00000384254 H7C417 338 aa3.44□□□□□ -1.86
RNU6-40P-201ENST00000384254 NVLO15381 856 aaKnown RBP3.44□□□□□ -1.86
RNU6-40P-201ENST00000384254 B4GALT5O43286 388 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms