RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SPARCP09486 303 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 GLRXP35754 106 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 ERVS71-1P61550 626 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 EFNB1P98172 346 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 RAB35Q15286 201 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 MSMPQ1L6U9 139 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 Q5PR19 223 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 CFAP77Q6ZQR2 320 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 OR1F12Q8NHA8 337 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 CNIH3Q8TBE1 160 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 PTP4A1Q93096 173 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 UBE2FQ969M7 185 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 GSX2Q9BZM3 304 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 WDR76Q9H967 626 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 HINT3Q9NQE9 182 aaKnown RBP16.7■□□□□ 0.26
GTF3A-201ENST00000381140 ZNF701Q9NV72 531 aaPredicted RBP16.7■□□□□ 0.26
GTF3A-201ENST00000381140 GDF2Q9UK05 429 aaPredicted RBP16.7■□□□□ 0.26
GTF3A-201ENST00000381140 COMMD3-BMI1R4GMX3 469 aa16.7■□□□□ 0.26
GTF3A-201ENST00000381140 OTOGQ6ZRI0 2925 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 CHD3Q12873 2000 aaKnown RBP16.69■□□□□ 0.26
GTF3A-201ENST00000381140 TRIM64A6NGJ6 449 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 B9A039 149 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 TMCC2O75069 709 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 NDUFS7O75251 213 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 CCDC159P0C7I6 412 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 BMP4P12644 408 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 WNT5AP41221 380 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 RAD52P43351 418 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 UCP2P55851 309 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 RPS7P62081 194 aaKnown RBP16.69■□□□□ 0.26
GTF3A-201ENST00000381140 TESK1Q15569 626 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 MST1LQ2TV78 715 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 SLC25A30Q5SVS4 291 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 SPATA46Q5T0L3 261 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 RGS7BPQ6MZT1 257 aaPredicted RBP16.69■□□□□ 0.26
GTF3A-201ENST00000381140 SLC18B1Q6NT16 456 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 CXXC5Q7LFL8 322 aaKnown RBP16.69■□□□□ 0.26
GTF3A-201ENST00000381140 BBS1Q8NFJ9 593 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 OR1J1Q8NGS3 322 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 ABHD4Q8TB40 342 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 MRPL37Q9BZE1 423 aaKnown RBP16.69■□□□□ 0.26
GTF3A-201ENST00000381140 CXXC4Q9H2H0 198 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 DUSP13Q9UII6 198 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 GRIP1Q9Y3R0 1128 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 PMF1-BGLAPU3KQ54 211 aa16.69■□□□□ 0.26
GTF3A-201ENST00000381140 SYNGR3O43761 229 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 ABHD16AO95870 558 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 COX5BP10606 129 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 PCSK6P29122 969 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 ENTPD1P49961 510 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 CSNK2BP67870 215 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 SWI5Q1ZZU3 235 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 ELFN2Q5R3F8 820 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 LRP11Q86VZ4 500 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 ERI1Q8IV48 349 aaKnown RBP16.68■□□□□ 0.26
GTF3A-201ENST00000381140 ZNF101Q8IZC7 436 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 LRRC75A-AS1Q8N1F1 130 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 MRPL24Q96A35 216 aaKnown RBP16.68■□□□□ 0.26
GTF3A-201ENST00000381140 ZMYND19Q96E35 227 aaPredicted RBP16.68■□□□□ 0.26
GTF3A-201ENST00000381140 C4orf45Q96LM5 186 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 VRK1Q99986 396 aaPredicted RBP16.68■□□□□ 0.26
GTF3A-201ENST00000381140 BCL2L14Q9BZR8 327 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 DYNLRB1Q9NP97 96 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 CYB5R1Q9UHQ9 305 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 KCNG2Q9UJ96 466 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 BLOC1S6Q9UL45 172 aa16.68■□□□□ 0.26
GTF3A-201ENST00000381140 MAP1AP78559 2803 aaPredicted RBP16.67■□□□□ 0.26
GTF3A-201ENST00000381140 A0A1W2PPW3 197 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 OR6C6A6NF89 314 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 SLC1A7O00341 560 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 ZNF593O00488 134 aaPredicted RBP16.67■□□□□ 0.26
GTF3A-201ENST00000381140 PRKYO43930 277 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 GLCEO94923 617 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 DBHP09172 617 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 PSKH1P11801 424 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 CRHBPP24387 322 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 GSTT1P30711 240 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 BLVRAP53004 296 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 HIST1H3AP68431 136 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 EFNB3Q15768 340 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 OCLNQ16625 522 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 HIST2H3PS2Q5TEC6 136 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 LINC01590Q5TEZ4 76 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 RFPL4BQ6ZWI9 263 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 HIST2H3AQ71DI3 136 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 TCEANCQ8N8B7 351 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 WFDC11Q8NEX6 87 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 OR6N2Q8NGY6 317 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 TMEM163Q8TC26 289 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 HDHD2Q9H0R4 259 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 PLCXD1Q9NUJ7 323 aa16.67■□□□□ 0.26
GTF3A-201ENST00000381140 AKAP9Q99996 3911 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 NGFP01138 241 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 IGHV4-39P01824 125 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 GABARAPL2P60520 117 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 PPP1CBP62140 327 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 APOFQ13790 326 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 ALKBH6Q3KRA9 238 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 MEDAGQ5VYS4 303 aa16.66■□□□□ 0.26
GTF3A-201ENST00000381140 ARL9Q6T311 187 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms