RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 BLACEA4D250 179 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 CXorf65A6NEN9 183 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 BCL2L11O43521 198 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 OR2F2O95006 317 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NTN1O95631 604 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 CLDN1O95832 211 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ACTL6AO96019 429 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PPBPP02775 128 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PRB1P04280 392 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 CD5P06127 495 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NR2F6P10588 404 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ACKR3P25106 362 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 LOXP28300 417 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PITPNAQ00169 270 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 OR2F1Q13607 317 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SLC36A1Q7Z2H8 476 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 P4HA3Q7Z4N8 544 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 GPR135Q8IZ08 494 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 FAM26EQ8N5C1 309 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM185AQ8NFB2 350 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 OR4A4PQ8NGN8 299 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NRIP2Q9BQI9 281 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NAA11Q9BSU3 229 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NMNAT1Q9HAN9 279 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 CALML5Q9NZT1 146 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 FAM96BQ9Y3D0 163 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SCN3AQ9NY46 2000 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SHISA3A0PJX4 238 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF860A6NHJ4 632 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 RAB36O95755 333 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 QDPRP09417 244 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 HSD3B1P14060 373 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF16P17020 682 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 HSD3B2P26439 372 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 CMPK1P30085 196 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 BDKRB2P30411 391 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 WNT5AP41221 380 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PRKXP51817 358 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 HBA1P69905 142 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NAAAQ02083 359 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PTGES3Q15185 160 aaKnown RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PNLIPRP3Q17RR3 467 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 VMACQ2NL98 169 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NKAIN1Q4KMZ8 207 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 OR52W1Q6IF63 320 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 CDPF1Q6NVV7 123 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 FIGNL1Q6PIW4 674 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SLC5A8Q8N695 610 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ABHD1Q96SE0 405 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 TMEM208Q9BTX3 173 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF426Q9BUY5 554 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ULBP3Q9BZM4 244 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ARL6Q9H0F7 186 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 PTGES2Q9H7Z7 377 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 MKKSQ9NPJ1 570 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 GAR1Q9NY12 217 aaKnown RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF282Q9UDV7 671 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 GDF2Q9UK05 429 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-204ENST00000369530 FBXL4Q9UKA2 621 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 DAPP1Q9UN19 280 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 NINQ8N4C6 2090 aa6.14□□□□□ -1.43
CSDE1-204ENST00000369530 SPTBP11277 2137 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 OR2W5A6NFC9 320 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CDC14BO60729 498 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CTNSO60931 367 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ATP1B1P05026 303 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SFTPBP07988 381 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MELTFP08582 738 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 EPXP11678 715 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ZNF35P13682 527 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 BMP7P18075 431 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 GABRR1P24046 479 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 PPP2R1BP30154 601 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 DLSTP36957 453 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 RPL3P39023 403 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 FEN1P39748 380 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 MESTQ5EB52 335 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 EMC4Q5J8M3 183 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 KHDRBS2Q5VWX1 349 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NHLRC1Q6VVB1 395 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 C5orf24Q7Z6I8 188 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 CCDC54Q8NEL0 328 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 OR10G2Q8NGC3 310 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NFKBIDQ8NI38 313 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SMIM4Q8WVI0 70 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SLC25A28Q96A46 364 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ABHD17AQ96GS6 310 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 HSH2DQ96JZ2 352 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 WFIKKN1Q96NZ8 548 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ALG8Q9BVK2 526 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 HDHD2Q9H0R4 259 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SLC25A18Q9H1K4 315 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 SEPSECSQ9HD40 501 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 A0A0G2JK05 382 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 A0A1W2PPQ1 181 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 A0A1W2PS29 197 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 TMPRSS11DO60235 418 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 GGCTO75223 188 aaKnown RBP6.13□□□□□ -1.43
CSDE1-204ENST00000369530 ENTPD6O75354 484 aa6.13□□□□□ -1.43
CSDE1-204ENST00000369530 NR2F1P10589 423 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms