RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 DEGS2Q6QHC5 323 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 ZNF322Q6U7Q0 402 aaPredicted RBP10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 WFDC8Q8IUA0 241 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 EGFL6Q8IUX8 553 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 STX19Q8N4C7 294 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 RFLNBQ8N5W9 214 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 ZC3HAV1LQ96H79 300 aaKnown RBP10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 OR8B4Q96RC9 309 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 COQ7Q99807 217 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 CENPMQ9NSP4 180 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 ERVK13-1Q9NX77 482 aa10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 EXOSC1Q9Y3B2 195 aaKnown RBP10.77□□□□□ -0.68
NIF3L1-201ENST00000359683 MYO9AB2RTY4 2548 aa10.77□□□□□ -0.69
NIF3L1-201ENST00000359683 ANKHD1Q8IWZ3 2542 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-201ENST00000359683 LOC100509620A0A075B734 347 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 IGHV1-18A0A0C4DH31 117 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF878C9JN71 531 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CELA3BP08861 270 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 LIMS3P0CW19 117 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 LIMS4P0CW20 117 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CRYGSP22914 178 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 STOMP27105 288 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 APEX1P27695 318 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 KIR2DL3P43628 341 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF83P51522 516 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CHN2P52757 468 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 GABARAPL2P60520 117 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 LHFPL3Q86UP9 236 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 MYPOPQ86VE0 399 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF679Q8IYX0 411 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 IL17RDQ8NFM7 739 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 FAM222BQ8WU58 562 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 POM121L2Q96KW2 1035 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ATF6BQ99941 703 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CDCA4Q9BXL8 241 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 NGBQ9NPG2 151 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 SLCO1C1Q9NYB5 712 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ERVK-18Q9QC07 812 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CREBBPQ92793 2442 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 PRSS44E7EML9 344 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 MAGEB4O15481 346 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 MRPS14O60783 128 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF254O75437 659 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 SULT1C4O75897 302 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 HTR1AP08908 422 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CECR9P0C854 216 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 OTX1P32242 354 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 HTR5AP47898 357 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ETV1P50549 477 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 GRB2P62993 217 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 IRF3Q14653 427 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 KCTD21Q4G0X4 260 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CDONQ4KMG0 1287 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ALKBH2Q6NS38 261 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 LRRN1Q6UXK5 716 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 PLEKHG7Q6ZR37 379 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 SPATC1Q76KD6 591 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 KCTD20Q7Z5Y7 419 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 KRT77Q7Z794 578 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 SLC30A7Q8NEW0 376 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 NR1H4Q96RI1 486 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 MYCBPQ99417 103 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 KCNJ15Q99712 375 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 SPOCK3Q9BQ16 436 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 ALG8Q9BVK2 526 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 MROQ9BYG7 248 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CRIM1Q9NZV1 1036 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 CLEC2DQ9UHP7 191 aa10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 MRM2Q9UI43 246 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-201ENST00000359683 DPRXA6NFQ7 191 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 METTL15A6NJ78 407 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 M0R1B8 84 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 PSMD9O00233 223 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 CASKO14936 926 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 RGS10O43665 173 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 ABHD16AO95870 558 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 H2BFMP0C1H6 154 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 ZNF35P13682 527 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 MYL12AP19105 171 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 PTAFRP25105 342 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 CD40P25942 277 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 DCTDP32321 178 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 APLNRP35414 380 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 GDI2P50395 445 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 TAF13Q15543 124 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 MEX3BQ6ZN04 569 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 PRSS48Q7RTY5 328 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 SYS1Q8N2H4 156 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 OR1J2Q8NGS2 313 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 SNX33Q8WV41 574 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 SLC7A6Q92536 515 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 MRPL48Q96GC5 212 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 TTTY10Q9BZA0 68 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 NIPAL2Q9H841 368 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 ELOVL3Q9HB03 270 aa10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 CHCHD3Q9NX63 227 aaKnown RBP10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 CAB39Q9Y376 341 aaPredicted RBP10.75□□□□□ -0.69
NIF3L1-201ENST00000359683 HEATR1Q9H583 2144 aaKnown RBP10.74□□□□□ -0.69
NIF3L1-201ENST00000359683 TNFAIP8O95379 198 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms