RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 POM121L2Q96KW2 1035 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 YTHDF1Q9BYJ9 559 aaKnown RBP22.01■■□□□ 1.11
SSBP3-202ENST00000357475 CCDC90BQ9GZT6 254 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 ELOVL3Q9HB03 270 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 BLOC1S6Q9UL45 172 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 SPTAN1Q13813 2472 aaKnown RBP22.01■■□□□ 1.11
SSBP3-202ENST00000357475 CADP27708 2225 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 IQCMA0A1B0GVH7 501 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 DPRXA6NFQ7 191 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 RGS10O43665 173 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 ABHD16AO95870 558 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 CCNOP22674 350 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 KIR2DL3P43628 341 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 GABARAPL2P60520 117 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 KRTAP27-1Q3LI81 207 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 CDONQ4KMG0 1287 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 ACBD4Q8NC06 268 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 DACH2Q96NX9 599 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 COQ7Q99807 217 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 INPP5EQ9NRR6 644 aa22.01■■□□□ 1.11
SSBP3-202ENST00000357475 EXOSC1Q9Y3B2 195 aaKnown RBP22.01■■□□□ 1.11
SSBP3-202ENST00000357475 ICE1Q9Y2F5 2266 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 C5orf49A4QMS7 147 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 TRIM64A6NGJ6 449 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 F5H5K5 113 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 PHYHO14832 338 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 H2BFMP0C1H6 154 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 CALCRP30988 508 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 MAP2K4P45985 399 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 PRKXP51817 358 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 EGR3Q06889 387 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 IRF3Q14653 427 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 KCTD21Q4G0X4 260 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 MEX3BQ6ZN04 569 aaKnown RBP22■■□□□ 1.11
SSBP3-202ENST00000357475 ZNF679Q8IYX0 411 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 SNX33Q8WV41 574 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 RNF166Q96A37 237 aaPredicted RBP22■■□□□ 1.11
SSBP3-202ENST00000357475 C4orf36Q96KX1 117 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 ACOXLQ9NUZ1 547 aa22■■□□□ 1.11
SSBP3-202ENST00000357475 J3QLW9 94 aa21.99■■□□□ 1.11
SSBP3-202ENST00000357475 ZNF19P17023 458 aa21.99■■□□□ 1.11
SSBP3-202ENST00000357475 MYL12AP19105 171 aa21.99■■□□□ 1.11
SSBP3-202ENST00000357475 TAF13Q15543 124 aa21.99■■□□□ 1.11
SSBP3-202ENST00000357475 KCTD18Q6PI47 426 aaPredicted RBP21.99■■□□□ 1.11
SSBP3-202ENST00000357475 GNG8Q9UK08 70 aa21.99■■□□□ 1.11
SSBP3-202ENST00000357475 C5orf63A6NC05 138 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 PTHP01270 115 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 COX5BP10606 129 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 SLC2A1P11166 492 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 CD40P25942 277 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 APLNRP35414 380 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 BSPH1Q075Z2 132 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 PRSS48Q7RTY5 328 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 SPRYD4Q8WW59 207 aaPredicted RBP21.98■■□□□ 1.11
SSBP3-202ENST00000357475 KCNJ15Q99712 375 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 CDCA4Q9BXL8 241 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 MROQ9BYG7 248 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 DOPEY2Q9Y3R5 2298 aa21.98■■□□□ 1.11
SSBP3-202ENST00000357475 USP9YO00507 2555 aaPredicted RBP21.97■■□□□ 1.11
SSBP3-202ENST00000357475 METTL15A6NJ78 407 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 RPP14O95059 124 aaKnown RBP21.97■■□□□ 1.11
SSBP3-202ENST00000357475 ACSM4P0C7M7 580 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 ZNF35P13682 527 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 OTX1P32242 354 aaPredicted RBP21.97■■□□□ 1.11
SSBP3-202ENST00000357475 PSMB10P40306 273 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 WNT5AP41221 380 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 GDI2P50395 445 aaKnown RBP21.97■■□□□ 1.11
SSBP3-202ENST00000357475 NAAAQ02083 359 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 C1QTNF12Q5T7M4 302 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 YIPF7Q8N8F6 280 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 ZNF485Q8NCK3 441 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 GRIP1Q9Y3R0 1128 aa21.97■■□□□ 1.11
SSBP3-202ENST00000357475 FASNP49327 2511 aaKnown RBP21.97■■□□□ 1.11
SSBP3-202ENST00000357475 IGHV2OR16-5A0A0B4J2B6 119 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 DEFB108AA8MXU0 73 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 E9PI62 339 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 TNFAIP8O95379 198 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 KRT8P05787 483 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 EPXP11678 715 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 HSD11B1P28845 292 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 GRB2P62993 217 aaKnown RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 MFGE8Q08431 387 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 C3orf36Q3SXR2 165 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 LIPNQ5VXI9 398 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 RHOUQ7L0Q8 258 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 NANOGP1Q8N7R0 232 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 GATAD2BQ8WXI9 593 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 PELI1Q96FA3 418 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 PLPPR2Q96GM1 343 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 NR1H4Q96RI1 486 aaPredicted RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 OR51B6Q9H340 312 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 BRD7Q9NPI1 651 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 ATPIF1Q9UII2 106 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 M0R135 149 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 SRSF10O75494 262 aaKnown RBP21.96■■□□□ 1.11
SSBP3-202ENST00000357475 PNPP00491 289 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 LALBAP00709 142 aa21.96■■□□□ 1.11
SSBP3-202ENST00000357475 CX3CR1P49238 355 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms