RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TMED6Q8WW62 240 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 SLC25A18Q9H1K4 315 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 KCMF1Q9P0J7 381 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 HSD17B6O14756 317 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CLEC3BP05452 202 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF8P17098 575 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CCR6P51684 374 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ADPRHP54922 357 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 UBE2NP61088 152 aaKnown RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF90Q03938 601 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF343Q6P1L6 599 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 LHX4Q969G2 390 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MRGPRX3Q96LB0 322 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 OR5M11Q96RB7 305 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 VN1R3Q9BXE9 311 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ALKBH4Q9NXW9 302 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 FKBP11Q9NYL4 201 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 TMED7Q9Y3B3 224 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CSAG2Q9Y5P2 127 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 WSB1Q9Y6I7 421 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MDH2P40926 338 aaKnown RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MFAP5Q13361 173 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF787Q6DD87 383 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 TRAT1Q6PIZ9 186 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 OR10J5Q8NHC4 309 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MED16Q9Y2X0 877 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 SLC17A2O00624 439 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 GPX5O75715 221 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 PRR35P0CG20 571 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 SULT1A3P0DMM9 295 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 SULT1A4P0DMN0 295 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 GLI3P10071 1580 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CD80P33681 288 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MADCAM1Q13477 382 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ALKAL1Q6UXT8 129 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CYB561A3Q8NBI2 242 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 OR8G5Q8NG78 346 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 GPR119Q8TDV5 335 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 C11orf98E9PRG8 122 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 BLVRBP30043 206 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CASP6P55212 293 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 WNT7BP56706 349 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 LHFPL2Q6ZUX7 228 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 NLRC3Q7RTR2 1065 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MAML2Q8IZL2 1156 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CDRT15L2A8MXV6 281 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MFNGO00587 321 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 PGA4P0DJD7 388 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 PGA5P0DJD9 388 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MMP9P14780 707 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CST5P28325 142 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 AFMIDQ63HM1 303 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CDC20BQ86Y33 519 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MCATQ8IVS2 390 aaKnown RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 GPR152Q8TDT2 470 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 VCX2Q9H322 139 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 KCNK15Q9H427 330 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF223Q9UK11 482 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 R4GMQ9 66 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 POM121CA8CG34 1229 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF727A8MUV8 499 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 PLRG1O43660 514 aaKnown RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 SLC6A12P48065 614 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 AKR1C1Q04828 323 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 HABP2Q14520 560 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 IL13RA2Q14627 380 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 MRPL52Q86TS9 123 aaKnown RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF439Q8NDP4 499 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 OR4A16Q8NH70 328 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 DNMT3BQ9UBC3 853 aaKnown RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 FLVCR1Q9Y5Y0 555 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 LCATP04180 440 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 NPY4RP50391 375 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 NDUFA6P56556 154 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 HTRA3P83110 453 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 JSRP1Q96MG2 331 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 RNF2Q99496 336 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 HRASLSQ9HDD0 168 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 TM7SF3Q9NS93 570 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 PTPRDP23468 1912 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 RNF4P78317 190 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 PRRT3Q5FWE3 981 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 A0A1W2PRU2 124 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF888P0CJ79 500 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 HOXD9P28356 352 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 FOXA1P55317 472 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 FOXK1P85037 733 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ODF4Q2M2E3 257 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 NPRL2Q8WTW4 380 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 GMLQ99445 158 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 TBX21Q9UL17 535 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 PLXNA1Q9UIW2 1896 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 RGPD3A6NKT7 1758 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 RGPD4Q7Z3J3 1758 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF593O00488 134 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 CCL16O15467 120 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 EMP3P54852 163 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 FPGSQ05932 587 aa6.01□□□□□ -1.45
VPS13B-202ENST00000357162 RPS26P11Q5JNZ5 115 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-202ENST00000357162 OR4B1Q8NGF8 309 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms