RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 SAXO2Q658L1 398 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TEX261Q6UWH6 196 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 FAM3CQ92520 227 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 CLSTN3Q9BQT9 956 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 BCO1Q9HAY6 547 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 U3KQ87 197 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 hCG_1809904A0A1W2PP81 198 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 A0A1W2PPE2 198 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 A0A1W2PR64 198 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 E5RGE8 158 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 RNASEK-C17orf49H0YIS7 233 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TPOP07202 933 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 SMIM17P0DL12 118 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 PRLHRP49683 370 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 ASCL1P50553 236 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TMEM183BQ1AE95 376 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 EID2Q8N6I1 236 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 NOL4LQ96MY1 436 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 AUNIPQ9H7T9 357 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 LANCL2Q9NS86 450 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 SIRT3Q9NTG7 399 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 HCFC1R1Q9NWW0 138 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 SLC17A4Q9Y2C5 497 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 NSG2Q9Y328 171 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 ZNF814B7Z6K7 855 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 ARRB2P32121 409 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 PXNP49023 591 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 PSMB2P49721 201 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TMEM267Q0VDI3 215 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 OR8G1Q15617 311 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 PRTGQ2VWP7 1150 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 PARS2Q7L3T8 475 aaKnown RBP10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 CMTM4Q8IZR5 234 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 OR5K2Q8NHB8 316 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 SLC22A12Q96S37 553 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 OR5K3A6NET4 321 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 GALR3O60755 368 aaPredicted RBP10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 HIST1H3AP68431 136 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 SLC35D3Q5M8T2 416 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TFAP2EQ6VUC0 442 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TMEM37Q8WXS4 190 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TUBAL3A6NHL2 446 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 C4orf47A7E2U8 309 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 BCL2L11O43521 198 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 TACR1P25103 407 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 SNRPGP62308 76 aaKnown RBP10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 ETV3LQ6ZN32 361 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 SLC16A13Q7RTY0 426 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 PGBD5Q8N414 524 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 OR51E1Q8TCB6 317 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 IL22RA2Q969J5 263 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 C16orf70Q9BSU1 422 aa10.09□□□□□ -0.79
GTF3C1-201ENST00000356183 PRAMEF26H0Y7S4 382 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 GYPAP02724 150 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 CD37P11049 281 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 CEBPBP17676 345 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 FPR3P25089 353 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 GPR12P47775 334 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 ZNF154Q13106 437 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 CYHR1Q6ZMK1 362 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 OR14A16Q8NHC5 309 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 TM4SF18Q96CE8 201 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 C8orf33Q9H7E9 229 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 HNRNPA1P09651 372 aaKnown RBP eCLIP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 CD46P15529 392 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 RPL29P47914 159 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 SSR4P51571 173 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 ZNF816Q0VGE8 651 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 ZNF66Q6ZN08 573 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 CBARPQ8N350 705 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 ERGIC1Q969X5 290 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 TEX37Q96LM6 180 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 LRFN3Q9BTN0 628 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 LTB4R2Q9NPC1 389 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 H3BNC9 293 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 SOX18P35713 384 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 RPS16P62249 146 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 UCN3Q969E3 161 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 SEH1LQ96EE3 360 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 INSM2Q96T92 566 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 GLIPR2Q9H4G4 154 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 TAAR2Q9P1P5 351 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 GPX5O75715 221 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 AKR7A3O95154 331 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 LRRTM3Q86VH5 581 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 NDUFB11Q9NX14 153 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 TRAPPC4Q9Y296 219 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 NRXN3Q9Y4C0 1643 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 GFRA2O00451 464 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 LY86O95711 162 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 GRINAQ7Z429 371 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 LSMEM1Q8N8F7 131 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 C19orf47Q8N9M1 422 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 ZNF485Q8NCK3 441 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 OR10AD1Q8NGE0 317 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 MARCH1Q8TCQ1 289 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 NUDT8Q8WV74 236 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 SPACA5Q96QH8 159 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 IKZF5Q9H5V7 419 aa10.08□□□□□ -0.8
GTF3C1-201ENST00000356183 ANKRD10Q9NXR5 420 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms