RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ETFDHQ16134 617 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 TATDN3Q17R31 274 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 SLC7A6Q92536 515 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 PRRX2Q99811 253 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 SARGQ9BW04 601 aa12.33□□□□□ -0.44
SMC6-201ENST00000351948 BDP1A6H8Y1 2624 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 MEIOCA2RUB1 952 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 TRABD2BA6NFA1 517 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 SC5DO75845 299 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 FAHP16930 419 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 PRKACAP17612 351 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 NFYBP25208 207 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
SMC6-201ENST00000351948 MAGEB1P43366 347 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 ZNF141Q15928 474 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 ADGRE4PQ86SQ3 457 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 OR8D4Q8NGM9 314 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 KCTD12Q96CX2 325 aaKnown RBP12.32□□□□□ -0.44
SMC6-201ENST00000351948 REEP6Q96HR9 211 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 UCK1Q9HA47 277 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 NUBP2Q9Y5Y2 271 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 RLFQ13129 1914 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 LOC100289279A0A1B0GTE1 492 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 ARF1P84077 181 aaKnown RBP12.32□□□□□ -0.44
SMC6-201ENST00000351948 CDK5R1Q15078 307 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 OR1M1Q8NGA1 313 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 OR2G2Q8NGZ5 317 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 TMEM43Q9BTV4 400 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 ZNF318Q5VUA4 2279 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 LYZL6O75951 148 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 NAGAP17050 411 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 CASP3P42574 277 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 RBP2P50120 134 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 RAB1AP62820 205 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 ZNF616Q08AN1 781 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 MEF2DQ14814 521 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
SMC6-201ENST00000351948 METTL11BQ5VVY1 283 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 FNDC9Q8TBE3 224 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 CHPT1Q8WUD6 406 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 MAFIPQ8WZ33 124 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 FZR1Q9UM11 496 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 TRBV5-3A0A0A0MS03 114 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 BORCS7-ASMTA0A0B4J1R7 106 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 A0A1W2PR77 199 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 LNP1A1A4G5 178 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 MEX3AA1L020 520 aaKnown RBP12.32□□□□□ -0.44
SMC6-201ENST00000351948 JUNBP17275 347 aaPredicted RBP12.32□□□□□ -0.44
SMC6-201ENST00000351948 NDUFB7P17568 137 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 FUT7Q11130 342 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 BEX5Q5H9J7 111 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 DCAF10Q5QP82 559 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 SIAH3Q8IW03 269 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 NUBPLQ8TB37 319 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 DCUN1D4Q92564 292 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 TSPAN32Q96QS1 320 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 SMIM3Q9BZL3 60 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 CES1P1Q9UKY3 287 aa12.32□□□□□ -0.44
SMC6-201ENST00000351948 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 OIP5O43482 229 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 IFNA5P01569 189 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 HLA-HP01893 362 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 ERVK-16P61578 105 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 HNF4GQ14541 408 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 PRSS53Q2L4Q9 553 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 GPR155Q7Z3F1 870 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 SMIM19Q96E16 107 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 ELMOD3Q96FG2 381 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 CPNE5Q9HCH3 593 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 PILRAQ9UKJ1 303 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 FAM90A27PA6NNH2 459 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 CRYABP02511 175 aaKnown RBP12.31□□□□□ -0.44
SMC6-201ENST00000351948 ALDOBP05062 364 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 C6orf183Q5T699 404 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 GPR87Q9BY21 358 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 RANBP3Q9H6Z4 567 aaPredicted RBP12.31□□□□□ -0.44
SMC6-201ENST00000351948 NAP1L6A6NFF2 107 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 TAF9Q16594 264 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 NDUFB11Q9NX14 153 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 TMEM235A6NFC5 223 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 OR6C65A6NJZ3 312 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 HPP00738 406 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 CPEP16870 476 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 ELK1P19419 428 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 PTGS2P35354 604 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 INPP5JQ15735 1006 aaPredicted RBP12.31□□□□□ -0.44
SMC6-201ENST00000351948 TMEM185AQ8NFB2 350 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 SEC22AQ96IW7 307 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 ZSWIM8A7E2V4 1837 aa12.31□□□□□ -0.44
SMC6-201ENST00000351948 OR5H15A6NDH6 313 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 NKX2-8O15522 239 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 UBL3O95164 117 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 NRASP01111 189 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 CTLA4P16410 223 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 CXorf67Q86X51 503 aaPredicted RBP12.3□□□□□ -0.44
SMC6-201ENST00000351948 KIF18BQ86Y91 864 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 LILRB2Q8N423 598 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 MAB21L2Q9Y586 359 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 R4GMQ9 66 aa12.3□□□□□ -0.44
SMC6-201ENST00000351948 F5H5P2 479 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms