RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 NT5CQ8TCD5 201 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 SDHCQ99643 169 aaPredicted RBP13.44□□□□□ -0.26
RRP1B-201ENST00000340648 TMEM127O75204 238 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 OPN5Q6U736 354 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 PRSS41Q7RTY9 318 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 UBE3DQ7Z6J8 389 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 ZSCAN4Q8NAM6 433 aaPredicted RBP13.44□□□□□ -0.26
RRP1B-201ENST00000340648 ZNF681Q96N22 645 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 GAS2L1Q99501 681 aaPredicted RBP13.44□□□□□ -0.26
RRP1B-201ENST00000340648 ABHD6Q9BV23 337 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 KCNK15Q9H427 330 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 MED29Q9NX70 200 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 CD207Q9UJ71 328 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 SRPK3Q9UPE1 567 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 B9D1Q9UPM9 204 aa13.44□□□□□ -0.26
RRP1B-201ENST00000340648 OR6C76A6NM76 312 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 GJE1A6NN92 205 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 JTBO76095 146 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 RPL12P30050 165 aaKnown RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 CTHP32929 405 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 SSBP1Q04837 148 aaKnown RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 RIN1Q13671 783 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 CDONQ4KMG0 1287 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 KTI12Q96EK9 354 aaPredicted RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 OR51B6Q9H340 312 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 MMACHCQ9Y4U1 282 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 RAB19A4D1S5 217 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 GSTZ1O43708 216 aaPredicted RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 ZFAND5O76080 213 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 HTR5AP47898 357 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 ZNF74Q16587 644 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 KIAA0895LQ68EN5 471 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 EXD3Q8N9H8 876 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 ZNF2Q9BSG1 426 aaPredicted RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 RHOFQ9HBH0 211 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 KCNIP1Q9NZI2 227 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 TAAR5O14804 337 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 PPP1R2P9O14990 202 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 CXCL10P02778 98 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 HSF1Q00613 529 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 KLF9Q13886 244 aaPredicted RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 MLF2Q15773 248 aaPredicted RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 LHX8Q68G74 356 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 PWWP2BQ6NUJ5 590 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 MISPQ8IVT2 679 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 WFDC6Q9BQY6 131 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 DNAJB12Q9NXW2 375 aaKnown RBP13.43□□□□□ -0.26
RRP1B-201ENST00000340648 C7orf66A4D0T2 115 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 GPR137BO60478 399 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 GABRA1P14867 456 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 RAC2P15153 192 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 FOLR1P15328 257 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 VEGFBP49765 207 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 RAB4BP61018 213 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 TRILQ7L0X0 811 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 BVESQ8NE79 360 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 OR4C3Q8NH37 302 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 TSLPQ969D9 159 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 SLC6A18Q96N87 628 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 TGIF2Q9GZN2 237 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 ASH2LQ9UBL3 628 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 PIGLQ9Y2B2 252 aa13.43□□□□□ -0.26
RRP1B-201ENST00000340648 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 OR2C1O95371 312 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 CD38P28907 300 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 ZNF266Q14584 549 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 ANKRD16Q6P6B7 361 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 OR2G3Q8NGZ4 309 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 OTOSQ8NHW6 89 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 ZNF75AQ96N20 296 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 OR8B4Q96RC9 309 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 S1PR5Q9H228 398 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 THSD7AQ9UPZ6 1657 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 HSPB2A8KAH6 182 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 HMSDA8MTL9 139 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 CD79AP11912 226 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 MYOGP15173 224 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 HTRA3P83110 453 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 TLE4Q04727 773 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 HSPB2Q16082 182 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 SEZ6L2Q6UXD5 910 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 FAM174AQ8TBP5 190 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 RBMXL1Q96E39 390 aaKnown RBP13.42□□□□□ -0.26
RRP1B-201ENST00000340648 SDSLQ96GA7 329 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 LAT2Q9GZY6 243 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 IFT22Q9H7X7 185 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 MRPS18AQ9NVS2 196 aaKnown RBP13.42□□□□□ -0.26
RRP1B-201ENST00000340648 TMEM272A0A1B0GTI8 110 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 PRAMEF25A6NGN4 478 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 CTSVO60911 334 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 CPN1P15169 458 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 CDKN2AP42771 156 aaKnown RBP13.42□□□□□ -0.26
RRP1B-201ENST00000340648 HSD17B13Q7Z5P4 300 aaPredicted RBP13.42□□□□□ -0.26
RRP1B-201ENST00000340648 PAPOLGQ9BWT3 736 aaKnown RBP13.42□□□□□ -0.26
RRP1B-201ENST00000340648 HINT2Q9BX68 163 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 CHRNA9Q9UGM1 479 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 ACAD8Q9UKU7 415 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 SLC17A4Q9Y2C5 497 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 TNFRSF10CO14798 259 aa13.42□□□□□ -0.26
RRP1B-201ENST00000340648 SHOXO15266 292 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms