RNA–Protein interactions for RNA: ENST00000299138.11

VPS35-201, Transcript of VPS35, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS35, Length 6,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-201ENST00000299138 ZNF77Q15935 545 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 OR2A2Q6IF42 318 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 STEAP1BQ6NZ63 245 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 DPY19L2P2Q6ZN68 376 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 Q6ZPB1 254 aaPredicted RBP5.86□□□□□ -1.47
VPS35-201ENST00000299138 OR52R1Q8NGF1 315 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 OR51L1Q8NGJ5 315 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 OR6M1Q8NGM8 313 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 AMDHD1Q96NU7 426 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 DEFB118Q96PH6 123 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 OR51B6Q9H340 312 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 FBXO34Q9NWN3 711 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 SLC23A1Q9UHI7 598 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 CLEC2DQ9UHP7 191 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 SLC6A14Q9UN76 642 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 KLF2Q9Y5W3 355 aaPredicted RBP5.86□□□□□ -1.47
VPS35-201ENST00000299138 LIPGQ9Y5X9 500 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 SLCO1B1Q9Y6L6 691 aa5.86□□□□□ -1.47
VPS35-201ENST00000299138 PLSCR5A0PG75 271 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 FAM221BA6H8Z2 402 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 GLOD5A6NK44 160 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 TMEM150CB9EJG8 249 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 GCM2O75603 506 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 CLEC2LP0C7M8 214 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A6P0DMU7 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A5P0DMU8 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A7P0DMV0 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A8P0DMV1 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A9P0DMV2 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 EPXP11678 715 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 HLA-GP17693 338 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 HIST1H1TP22492 207 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 ID2Q02363 134 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 C18orf21Q32NC0 220 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A2Q5DJT8 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A1Q5HYN5 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 LEG1Q6P5S2 330 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 DRAM2Q6UX65 266 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 NRMQ8IXM6 262 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 ZNF485Q8NCK3 441 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 NUDT10Q8NFP7 164 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 OR4F15Q8NGB8 312 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CT45A3Q8NHU0 189 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 NUDT11Q96G61 164 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 TSSK2Q96PF2 358 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 MS4A10Q96PG2 267 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 TINAGL1Q9GZM7 467 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 SMG9Q9H0W8 520 aaKnown RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 DNAJB11Q9UBS4 358 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 GPR160Q9UJ42 338 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 FNDC1Q4ZHG4 1894 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 XKRY2A2RUG3 117 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 MYADML2A6NDP7 307 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 OR4C45A6NMZ5 311 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 GJE1A6NN92 205 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 IFITM5A6NNB3 132 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 AKR7A2O43488 359 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 HYAL3O43820 417 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 ERGP11308 486 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 PRDX1Q06830 199 aaKnown RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 LRRC32Q14392 662 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 LRRC73Q5JTD7 316 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 TEX30Q5JUR7 227 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 PSRC1Q6PGN9 363 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 FA2HQ7L5A8 372 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 TSEN54Q7Z6J9 526 aaKnown RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 GPR137CQ8N3F9 429 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 ZFP62Q8NB50 900 aaPredicted RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 OR4K14Q8NGD5 310 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 STT3BQ8TCJ2 826 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CMBLQ96DG6 245 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 RHNO1Q9BSD3 238 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 GNB4Q9HAV0 340 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 HRASLSQ9HDD0 168 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 PRSS16Q9NQE7 514 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 P4HTMQ9NXG6 502 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 PTPRFP10586 1907 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 TMEM82A0PJX8 343 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 ANKRD20A5PA0PJZ0 165 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 HSPB6O14558 160 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 C1SP09871 688 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 PRSS56P0CW18 603 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 BSGP35613 385 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 UQCRFS1P47985 274 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 GNG10P50151 68 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 TCTAP57738 103 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 RAE1P78406 368 aaKnown RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 TGFBR3Q03167 851 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 ELAVL3Q14576 367 aaKnown RBP5.85□□□□□ -1.47
VPS35-201ENST00000299138 RPE65Q16518 533 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 OR8G2PQ6IF36 304 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 SLC48A1Q6P1K1 146 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 SLC39A11Q8N1S5 342 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 MTURNQ8N3F0 131 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 ZDHHC22Q8N966 263 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 OR52L2PQ8NGH6 319 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 CDS1Q92903 461 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 GPR61Q9BZJ8 451 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 METTL9Q9H1A3 318 aa5.85□□□□□ -1.47
VPS35-201ENST00000299138 BARX1Q9HBU1 254 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms