RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 AADACP22760 399 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 BARHL1Q9BZE3 327 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 GPR84Q9NQS5 396 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 KCNE3Q9Y6H6 103 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 WNK3Q9BYP7 1800 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 FAM186AA6NE01 2351 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 DLEC1Q9Y238 1755 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 A0A1W2PPC4 97 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 M0R135 149 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 GUSBP08236 651 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 CDK5Q00535 292 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 SSBP1Q04837 148 aaKnown RBP9.77□□□□□ -0.85
CD44-201ENST00000263398 PAN3Q58A45 887 aaKnown RBP9.77□□□□□ -0.85
CD44-201ENST00000263398 FAAP20Q6NZ36 180 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 TMEM178AQ8NBL3 297 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 SLC38A9Q8NBW4 561 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 OR11L1Q8NGX0 322 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 NUDCD2Q8WVJ2 157 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 EMG1Q92979 244 aaKnown RBP9.77□□□□□ -0.85
CD44-201ENST00000263398 APH1AQ96BI3 265 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 ALG14Q96F25 216 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 ZNF799Q96GE5 643 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 WDFY2Q96P53 400 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 AUNIPQ9H7T9 357 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 DYNLRB1Q9NP97 96 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 CTSFQ9UBX1 484 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 SLC5A6Q9Y289 635 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 PRELID3BQ9Y3B1 194 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 A0A1W2PNR3 127 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 RPS2P15880 293 aaKnown RBP9.77□□□□□ -0.85
CD44-201ENST00000263398 GALP22466 123 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 DCTDP32321 178 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 EMDP50402 254 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 PLXDC2Q6UX71 529 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 TFAP2EQ6VUC0 442 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 SIRT6Q8N6T7 355 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 OR1S2Q8NGQ3 325 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 NANPQ8TBE9 248 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 SLC25A32Q9H2D1 315 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 SLAMF7Q9NQ25 335 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 SLC22A11Q9NSA0 550 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 MED29Q9NX70 200 aa9.77□□□□□ -0.85
CD44-201ENST00000263398 EXO1Q9UQ84 846 aaKnown RBP9.77□□□□□ -0.85
CD44-201ENST00000263398 PCYT1BQ9Y5K3 369 aaPredicted RBP9.77□□□□□ -0.85
CD44-201ENST00000263398 TUSC2O75896 110 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 TPPPO94811 219 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 OR4E1P0C645 316 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 CTGFP29279 349 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 BAXQ07812 192 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 DBPQ10586 325 aaPredicted RBP9.76□□□□□ -0.85
CD44-201ENST00000263398 EXOSC2Q13868 293 aaKnown RBP9.76□□□□□ -0.85
CD44-201ENST00000263398 SLC25A35Q3KQZ1 300 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 SYT13Q7L8C5 426 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 BTLAQ7Z6A9 289 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 S100A7AQ86SG5 101 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 TEX19Q8NA77 164 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 OR52H1Q8NGJ2 320 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 OR4Q3Q8NH05 313 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 TMED6Q8WW62 240 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 UCN3Q969E3 161 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 EID2BQ96D98 161 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 WDR34Q96EX3 536 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 PTDSS2Q9BVG9 487 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 GPR173Q9NS66 373 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 ANKRD10Q9NXR5 420 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 POMT2Q9UKY4 750 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 SIGLEC7Q9Y286 467 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 SPAG17Q6Q759 2223 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 A0A087WUJ7 227 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 FRG2CA6NGY1 282 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 AKR7A2O43488 359 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 HRO43593 1189 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 PRSS23O95084 383 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 DUSP1P28562 367 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 SHHQ15465 462 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 GPR32P1Q8NGA4 272 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 ATOH1Q92858 354 aaPredicted RBP9.76□□□□□ -0.85
CD44-201ENST00000263398 CCDC74AQ96AQ1 378 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 B9D1Q9UPM9 204 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 DOCK5Q9H7D0 1870 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 IMPA2O14732 288 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 CYB5BO43169 146 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 XRCC3O43542 346 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
CD44-201ENST00000263398 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.76□□□□□ -0.85
CD44-201ENST00000263398 OR5M1Q8NGP8 315 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 OR2G3Q8NGZ4 309 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 ASB13Q8WXK3 278 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
CD44-201ENST00000263398 MRGPRX4Q96LA9 322 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 SPACA5Q96QH8 159 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 OR2A14Q96R47 310 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 KCNJ15Q99712 375 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 ZNF2Q9BSG1 426 aaPredicted RBP9.76□□□□□ -0.85
CD44-201ENST00000263398 KCNIP2Q9NS61 270 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 KLK11Q9UBX7 282 aa9.76□□□□□ -0.85
CD44-201ENST00000263398 SBF2Q86WG5 1849 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 SLC17A2O00624 439 aa9.75□□□□□ -0.85
CD44-201ENST00000263398 NRG2O14511 850 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms