RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 WDSUB1Q8N9V3 476 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 OR52B4Q8NGK2 314 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 SLC39A7Q92504 469 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 LINC00052Q96N35 136 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 OR2M2Q96R28 347 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 ALKBH4Q9NXW9 302 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 COPZ2Q9P299 210 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 PCDHGA5Q9Y5G8 931 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 ETV7Q9Y603 341 aa14.05□□□□□ -0.16
LRFN1-201ENST00000248668 MRPS18BQ9Y676 258 aaKnown RBP14.05□□□□□ -0.16
LRFN1-201ENST00000248668 CEP250Q9BV73 2442 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 TMEM272A0A1B0GTI8 110 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 GGT3PA6NGU5 568 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 CFDP00746 253 aaPredicted RBP14.04□□□□□ -0.16
LRFN1-201ENST00000248668 EXOSC2Q13868 293 aaKnown RBP14.04□□□□□ -0.16
LRFN1-201ENST00000248668 C5orf46Q6UWT4 87 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 COMMD2Q86X83 199 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 OR2M3Q8NG83 312 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 RBP7Q96R05 134 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 G6PC2Q9NQR9 355 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 AKAP7Q9P0M2 348 aaPredicted RBP14.04□□□□□ -0.16
LRFN1-201ENST00000248668 ZNF69Q9UC07 566 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 ANKRD20A5PA0PJZ0 165 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 KLK3P07288 261 aaPredicted RBP14.04□□□□□ -0.16
LRFN1-201ENST00000248668 AP3S2P59780 193 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 RPS18P62269 152 aaKnown RBP14.04□□□□□ -0.16
LRFN1-201ENST00000248668 PCOLCEQ15113 449 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 LINC00518Q8N0U6 118 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 DEFB123Q8N688 67 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 FAM46BQ96A09 425 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 ZNF775Q96BV0 537 aaPredicted RBP14.04□□□□□ -0.16
LRFN1-201ENST00000248668 FGGYQ96C11 551 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 CMTM3Q96MX0 182 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 SPACA5Q96QH8 159 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 HHLA2Q9UM44 414 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 TECTAO75443 2155 aa14.04□□□□□ -0.16
LRFN1-201ENST00000248668 TRAV20A0A0B4J274 112 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 RBBP9O75884 186 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 RLN1P04808 185 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 CSRP1P21291 193 aaKnown RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ZNF81P51508 661 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ZP1P60852 638 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 UBE2MP61081 183 aaKnown RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 TOMM20Q15388 145 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 MARVELD3Q96A59 401 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 SLAMF6Q96DU3 332 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 MRGPRX4Q96LA9 322 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 METTL17Q9H7H0 456 aaPredicted RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 IFT22Q9H7X7 185 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ZFP64Q9NPA5 681 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ING4Q9UNL4 249 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 XRCC3O43542 346 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ECDO95905 644 aaPredicted RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 GLAP06280 429 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 UMODP07911 640 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ANOS1P23352 680 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 SUMO3P55854 103 aaPredicted RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 C3orf33Q6P1S2 294 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 FDX2Q6P4F2 183 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 C7orf50Q9BRJ6 194 aaKnown RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 SOX7Q9BT81 388 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 PPA2Q9H2U2 334 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 PPIEQ9UNP9 301 aaKnown RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 B3GALT5Q9Y2C3 310 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 SLC17A2O00624 439 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ZNF208O43345 1280 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 CCL3P10147 92 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 GTF2F2P13984 249 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 HTR2CP28335 458 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ANKRD16Q6P6B7 361 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 ZNF454Q8N9F8 522 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 OR4C16Q8NGL9 310 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 OR10Z1Q8NGY1 313 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 WDR89Q96FK6 387 aaPredicted RBP14.03□□□□□ -0.16
LRFN1-201ENST00000248668 PLEKHA1Q9HB21 404 aa14.03□□□□□ -0.16
LRFN1-201ENST00000248668 LOC100289279A0A1B0GTE1 492 aa14.02□□□□□ -0.16
LRFN1-201ENST00000248668 RPS10-NUDT3A0A1W2PQS6 291 aa14.02□□□□□ -0.16
LRFN1-201ENST00000248668 OC90Q02509 493 aaPredicted RBP14.02□□□□□ -0.16
LRFN1-201ENST00000248668 ZP4Q12836 540 aa14.02□□□□□ -0.16
LRFN1-201ENST00000248668 CD276Q5ZPR3 534 aa14.02□□□□□ -0.16
LRFN1-201ENST00000248668 ZNF782Q6ZMW2 699 aaPredicted RBP14.02□□□□□ -0.16
LRFN1-201ENST00000248668 CHCHD2Q9Y6H1 151 aaPredicted RBP14.02□□□□□ -0.16
LRFN1-201ENST00000248668 F10P00742 488 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 CSN2P05814 226 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 TUSC1Q2TAM9 212 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 FAM209BQ5JX69 171 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 GLT8D1Q68CQ7 371 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 AGBL5Q8NDL9 886 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 OR10S1Q8NGN2 331 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 OR2T35Q8NGX2 323 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 C12orf57Q99622 126 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF160Q9HCG1 818 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 ASH2LQ9UBL3 628 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 A0A1W2PPC1 479 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 SULT2B1O00204 365 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 SMAD9O15198 467 aaKnown RBP14.02□□□□□ -0.17
LRFN1-201ENST00000248668 RAB14P61106 215 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 GRK1Q15835 563 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 MOGAT2Q3SYC2 334 aa14.02□□□□□ -0.17
LRFN1-201ENST00000248668 RAET1LQ5VY80 246 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms