RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PRSS38A1L453 326 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 LGI1O95970 557 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 OMGP23515 440 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 GCAP28676 217 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 BLVRBP30043 206 aaPredicted RBP5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ERVFC1P60507 584 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SLC35A2P78381 396 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF789Q5FWF6 425 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 NHLRC1Q6VVB1 395 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 NEIL2Q969S2 332 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 NOX4Q9NPH5 578 aa5.58□□□□□ -1.52
VPS13D-201ENST00000011700 SOWAHBA6NEL2 793 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SLC16A7O60669 478 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CST5P28325 142 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CD38P28907 300 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 DUSP8Q13202 625 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 RNPS1Q15287 305 aaKnown RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 BCL7AQ4VC05 210 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 FBXO48Q5FWF7 155 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 ELFN2Q5R3F8 820 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 GRASPQ7Z6J2 395 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 C19orf47Q8N9M1 422 aaKnown RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 LGALS14Q8TCE9 139 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 MRGPRX4Q96LA9 322 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 BET1LQ9NYM9 111 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 GPR52Q9Y2T5 361 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 A0A1B0GX78 115 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 FURINP09958 794 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 ABOP16442 354 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 BSGP35613 385 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 BMPR1AP36894 532 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 HYAL4Q2M3T9 481 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 VWA2Q5GFL6 755 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CARD17Q5XLA6 110 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 GDF6Q6KF10 455 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 RPUSD3Q6P087 351 aaKnown RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 ASCL5Q7RTU5 278 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 NRARPQ7Z6K4 114 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR10X1Q8NGY0 326 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 BRI3BPQ8WY22 251 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 LRRC3BQ96PB8 259 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 F2RL3Q96RI0 385 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 AK3Q9UIJ7 227 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SLC45A2Q9UMX9 530 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SORBS2O94875 1100 aaKnown RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 FGF2P09038 288 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CST2P09228 141 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SDHAP31040 664 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 GPR3P46089 330 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 NKAIN1Q4KMZ8 207 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 EXD3Q8N9H8 876 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SMIM4Q8WVI0 70 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 ZMYND19Q96E35 227 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OPALINQ96PE5 141 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TRAF4Q9BUZ4 470 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 UCK1Q9HA47 277 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 RHCGQ9UBD6 479 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CTNSO60931 367 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TUSC2O75896 110 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CLN3Q13286 438 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 UBE3DQ7Z6J8 389 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 NAGSQ8N159 534 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR5D13Q8NGL4 314 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TTC9Q92623 222 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CMBLQ96DG6 245 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SLC35B3Q9H1N7 401 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SYNPO2LQ9H987 977 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 MED16Q9Y2X0 877 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 A0A1W2PP55 124 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 A8MUA0 341 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TOX3O15405 576 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TRMT12Q53H54 448 aaKnown RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SECTM1Q8WVN6 248 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SMIM7Q9BQ49 75 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TMEM70Q9BUB7 260 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 EDEM2Q9BV94 578 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 BEX2Q9BXY8 128 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 BEX1Q9HBH7 125 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 NHSL1Q5SYE7 1610 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 IGKV6-21A0A0C4DH24 114 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR2A25A4D2G3 310 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 ZNF727A8MUV8 499 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 GATCO43716 136 aaKnown RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 FBXO24O75426 580 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR10J4P0C629 311 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 HOXA11P31270 313 aaPredicted RBP5.57□□□□□ -1.52
VPS13D-201ENST00000011700 C21orf58P58505 322 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 NFATC4Q14934 902 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 LRRC15Q8TF66 581 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 EID2BQ96D98 161 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 RAB6CQ9H0N0 254 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 IKZF5Q9H5V7 419 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 CYSLTR2Q9NS75 346 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 PDE6DO43924 150 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 PTTG1IPP53801 180 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 TEX261Q6UWH6 196 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 C17orf78Q8N4C9 275 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 SLC26A10Q8NG04 563 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR9Q2Q8NGE9 314 aa5.57□□□□□ -1.52
VPS13D-201ENST00000011700 OR51F2Q8NH61 342 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms