RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 FstP47931 344 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gpr160Q3U3F9 336 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Elavl4Q61701 385 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Bcas1Q80YN3 633 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Katnal1Q8K0T4 488 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Erlec1Q8VEH8 483 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr444Q8VFS6 310 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn1r43Q8VIC9 329 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tomm40lQ9CZR3 308 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ceacam13Q9DAT7 263 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Myo5aQ99104 1853 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Numa1E9Q7G0 2094 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 NynrinQ5DTZ0 1840 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Znf106O88466 1888 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1089A0A1L1SRK6 311 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1018A2ASV3 311 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr889L7N1Y6 314 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Prl8a2O54832 240 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 H2-K1P01901 369 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lsm5P62322 91 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tcf7Q00417 419 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 TefmQ5SSK3 364 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CelQ64285 599 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1126Q7TR49 314 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rspry1Q8BVR6 576 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 DctdQ8K2D6 178 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Clec14aQ8VCP9 459 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1008Q8VGC7 313 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Adam33Q923W9 797 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Eef1akmt1Q9CY45 214 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dpep3Q9DA79 493 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tnfrsf22Q9ER62 198 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1157A2AVC4 312 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 2410141K09RikK7N769 464 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Phlda2O08969 144 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Agr2O88312 175 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nkx2-6P43688 289 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gpr85P60894 370 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fam187bQ0VAY3 358 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 BB287469Q3UT53 144 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Serinc4Q5XK03 492 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Il15raQ60819 263 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1113Q7TR54 326 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr857Q7TRF7 309 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc5a7Q8BGY9 580 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Plcxd3Q8BLJ3 321 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Q8C784 167 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr488Q8VG02 314 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem175Q9CXY1 499 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CsQ9CZU6 464 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 C1galt1c1Q9JMG2 316 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lhx8O35652 367 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc2a1P17809 492 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cd40P27512 289 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pitx2P97474 317 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nol4lQ6DIB4 494 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Abhd17bQ7M759 288 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Mboat1Q8BH98 492 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 NifkQ91VE6 317 aaKnown RBP9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr27Q9EQ90 311 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nkain4Q9JMG4 208 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc35a2Q9R0M8 390 aa9.43□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zgrf1Q0VGT4 1863 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem185aA2AF53 350 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ldlrad1D3YYZ1 218 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pcdh12O55134 1180 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Sp3O70494 783 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cd8aP01731 247 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cbr2P08074 244 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 MocosQ14CH1 862 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dio1Q61153 257 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zfp157Q6PCM4 567 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Q80VP5 184 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Plcxd1Q8CHS4 345 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CcnqQ8QZR8 250 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr777Q8VFH3 311 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1501Q8VFQ3 315 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 RbpmsQ9WVB0 197 aaKnown RBP9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr773F6VS78 311 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nkx2-2P42586 273 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1428Q0VDY1 314 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr285Q7TS17 319 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Hs3st3a1Q8BKN6 393 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Inpp5kQ8C5L6 468 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1232Q8VEX7 311 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr1491Q8VEZ5 319 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr772Q8VGC5 311 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 SmoxQ99K82 555 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ube2fQ9CY34 185 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Alkbh4Q9D8F1 300 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pla2g12aQ9EPR2 192 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 FastkQ9JIX9 511 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Hsf4Q9R0L1 492 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 SrpxQ9R0M3 464 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gon4lQ9DB00 2260 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dcst2A0A140LIJ0 701 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kiaa1324A2AFS3 1009 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Btbd8D3YUB6 377 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Pcdh17E9PXF0 1157 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rarres1F6ZIS7 283 aa9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 67.1 ms