RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 RDH10Q8IZV5 341 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OR8H2Q8N162 312 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 MS4A15Q8N5U1 240 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 FAM169BQ8N8A8 192 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 CNEP1R1Q8N9A8 125 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF610Q8N9Z0 462 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 LRRC75AQ8NAA5 344 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 POMGNT2Q8NAT1 580 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ADPRHL1Q8NDY3 354 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 C1orf162Q8NEQ5 155 aaPredicted RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OR4K5Q8NGD3 323 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OR9K2Q8NGE7 335 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OR13C2Q8NGS9 318 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OR6F1Q8NGZ6 308 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 MOSPD2Q8NHP6 518 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 LIPHQ8WWY8 451 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 DEDD2Q8WXF8 326 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ACOT11Q8WXI4 607 aaPredicted RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 MUCL1Q96DR8 90 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 DIRAS2Q96HU8 199 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 IL4I1Q96RQ9 567 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 SOSTQ9BQB4 213 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 C7orf50Q9BRJ6 194 aaKnown RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 CENPOQ9BU64 300 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TSSK6Q9BXA6 273 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 SLC19A3Q9BZV2 496 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ACTR6Q9GZN1 396 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 C12orf49Q9H741 205 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 NEK6Q9HC98 313 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 SMURF1Q9HCE7 757 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 AMBNQ9NP70 447 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 OBP2BQ9NPH6 170 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 BEX4Q9NWD9 120 aaPredicted RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 ING3Q9NXR8 418 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 HAO2Q9NYQ3 351 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TAS2R5Q9NYW4 299 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TVP23BQ9NYZ1 205 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 CRIM1Q9NZV1 1036 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 MALT1Q9UDY8 824 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 PRSS50Q9UI38 385 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 RASD1Q9Y272 281 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM5Q9Y2B1 443 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 B3GALT5Q9Y2C3 310 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 CAB39Q9Y376 341 aaPredicted RBP4.62□□□□□ -1.67
SHMT1-211ENST00000618902 FLVCR1Q9Y5Y0 555 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 HIVEP2P31629 2446 aa4.62□□□□□ -1.67
SHMT1-211ENST00000618902 JMJD1CQ15652 2540 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TRAV27A0A087WT01 109 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 A0A1W2PQL4 384 aaPredicted RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 CTDSP2O14595 271 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 SIAH2O43255 324 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 ORC5O43913 435 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 PTP4A3O75365 173 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 SLC43A1O75387 559 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 IGHV3-9P01782 118 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 RAF1P04049 648 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 THBDP07204 575 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 IGFBP1P08833 259 aaPredicted RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 IFI30P13284 250 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 PRF1P14222 555 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 C4BPBP20851 252 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 HTR1FP30939 366 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TALDO1P37837 337 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 AQP2P41181 271 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 GPR4P46093 362 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 OMPP47874 163 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 MTNR1BP49286 362 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 EVX1P49640 407 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 SELENOPP49908 381 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 RPS4XP62701 263 aaKnown RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 GUCA2AQ02747 115 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF91Q05481 1191 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 RPL18Q07020 188 aaKnown RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 FAM27E3Q08E93 113 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 DBPQ10586 325 aaPredicted RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 ZP4Q12836 540 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 MRPL28Q13084 256 aaKnown RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TESK1Q15569 626 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TSC22D1Q15714 1073 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 SSX1Q16384 188 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 ZFP69Q49AA0 526 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TIMM23BQ5SRD1 257 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 PHYHD1Q5SRE7 291 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 SFRP5Q5T4F7 317 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TSPO2Q5TGU0 170 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 RSBN1Q5VWQ0 802 aaPredicted RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 SHEQ5VZ18 495 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 PLET1Q6UQ28 207 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 THSD4Q6ZMP0 1018 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 STAC2Q6ZMT1 411 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 ZNF730Q6ZMV8 503 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TMPRSS11FQ6ZWK6 438 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 MBOAT2Q6ZWT7 520 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 CREB3L2Q70SY1 520 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 H1FNTQ75WM6 255 aaPredicted RBP4.61□□□□□ -1.67
SHMT1-211ENST00000618902 HDDC2Q7Z4H3 204 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM200AQ86VY9 491 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TCTE3Q8IZS6 198 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 TMEM123Q8N131 208 aa4.61□□□□□ -1.67
SHMT1-211ENST00000618902 GABRG1Q8N1C3 465 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 1026.9 ms