RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 LRRN1Q6UXK5 716 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 GCNT2Q8N0V5 402 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 LRRC18Q8N456 261 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 RFLNBQ8N5W9 214 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 PHYHIPQ92561 330 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 BOD1Q96IK1 185 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 PIGMQ9H3S5 423 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 MOB1AQ9H8S9 216 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 SP140LQ9H930 580 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 DDX28Q9NUL7 540 aaKnown RBP9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 LRP12Q9Y561 859 aa9.29□□□□□ -0.92
NEDD4L-224ENST00000588712 TRDV1A0A1B0GX56 115 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 LALBAP00709 142 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 IGHV3-9P01782 118 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 B4GALT1P15291 398 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 FGF9P31371 208 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 TUBA1BP68363 451 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ALKBH1Q13686 389 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 RAB35Q15286 201 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 CTF1Q16619 201 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 YIF1BQ5BJH7 314 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ELFN2Q5R3F8 820 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 OR7E24Q6IFN5 339 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 CD200R1LQ6Q8B3 271 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 TUBA1AQ71U36 451 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 LINGO2Q7L985 606 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 C1orf162Q8NEQ5 155 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 KBTBD8Q8NFY9 601 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 SPTSSAQ969W0 71 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 C12orf43Q96C57 262 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ZNF837Q96EG3 531 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 MAP6Q96JE9 813 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ATF6BQ99941 703 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 MOV10Q9HCE1 1003 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ATPIF1Q9UII2 106 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 R4GMQ9 66 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 LOC400499M0QZD8 3231 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 PIEZO2Q9H5I5 2752 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 TMEM269A0A1B0GVZ9 245 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 H3BMQ9 156 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 SGCEO43556 437 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 GATBO75879 557 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 TNFSF13O75888 250 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 RPP14O95059 124 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 UBL3O95164 117 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 GADD45AP24522 165 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 GDI2P50395 445 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 FOXB2Q5VYV0 432 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 TMEM53Q6P2H8 277 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 CORO6Q6QEF8 472 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ARL9Q6T311 187 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 SLC16A12Q6ZSM3 486 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 USP43Q70EL4 1123 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 OR5AK2Q8NH90 309 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 GHSRQ92847 366 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 AMELYQ99218 206 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 KCNJ15Q99712 375 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 HDHD5Q9BXW7 423 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 TTTY10Q9BZA0 68 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 PLEK2Q9NYT0 353 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ZNF629Q9UEG4 869 aaPredicted RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 PRSS50Q9UI38 385 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ST6GALNAC2Q9UJ37 374 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 FBXL3Q9UKT7 428 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 ZNF281Q9Y2X9 895 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 SF3B6Q9Y3B4 125 aaKnown RBP9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 MED12LQ86YW9 2145 aa9.28□□□□□ -0.92
NEDD4L-224ENST00000588712 SVILO95425 2214 aa9.27□□□□□ -0.92
NEDD4L-224ENST00000588712 PHF3Q92576 2039 aaKnown RBP9.27□□□□□ -0.92
NEDD4L-224ENST00000588712 E9PI62 339 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 E9PLN8 166 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 PSMD9O00233 223 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 RER1O15258 196 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 RGS9O75916 674 aaPredicted RBP9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 GLI4P10075 376 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 COX5BP10606 129 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 MAPK3P27361 379 aaPredicted RBP9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 UGT2B10P36537 528 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 CRYBB2P43320 205 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 SLC3A1Q07837 685 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 ZNF704Q6ZNC4 412 aaPredicted RBP9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 CFAP77Q6ZQR2 320 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 SEM1Q6ZVN7 128 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 SKA3Q8IX90 412 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 OR1K1Q8NGR3 316 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 OR2G2Q8NGZ5 317 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 RPS4Y2Q8TD47 263 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 STARD4Q96DR4 205 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 FBXO17Q96EF6 278 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 VKORC1Q9BQB6 163 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 CHCHD6Q9BRQ6 235 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 RNF121Q9H920 327 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 EXOSC4Q9NPD3 245 aaKnown RBP9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 TLN1Q9Y490 2541 aaKnown RBP9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 LOC100506127A0A0U1RQW1 187 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 CIB4A0PJX0 185 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 OR6C6A6NF89 314 aa9.27□□□□□ -0.93
NEDD4L-224ENST00000588712 TRIM64BA6NI03 449 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms