RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 ECHS1P30084 290 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 CDAP32320 146 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 CDKN2CP42773 168 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 CD47Q08722 323 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 MAPK11Q15759 364 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 ZNF74Q16587 644 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 HHATQ5VTY9 493 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 ZNF841Q6ZN19 808 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 Q6ZR03 302 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 PDZD9Q8IXQ8 264 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 C4orf33Q8N1A6 199 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 OR8G5Q8NG78 346 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 RCC1LQ96I51 464 aaKnown RBP9.17□□□□□ -0.94
CASC3-208ENST00000583649 RBP7Q96R05 134 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 SIRPDQ9H106 197 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 PCDHAC1Q9H158 963 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 MMP28Q9H239 520 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 TAS2R5Q9NYW4 299 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 NOP16Q9Y3C1 178 aaKnown RBP9.17□□□□□ -0.94
CASC3-208ENST00000583649 PCDHGB5Q9Y5G0 923 aa9.17□□□□□ -0.94
CASC3-208ENST00000583649 TRAV38-1A0A0B4J264 116 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 ADAM20O43506 726 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 ZCCHC18P0CG32 403 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 PF4V1P10720 104 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 IGLL1P15814 213 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 SLC6A2P23975 617 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 RGS6P49758 472 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 ZNF133P52736 654 aaPredicted RBP9.16□□□□□ -0.94
CASC3-208ENST00000583649 CDH12P55289 794 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 SCRN3Q0VDG4 424 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 HNRNPA0Q13151 305 aaKnown RBP9.16□□□□□ -0.94
CASC3-208ENST00000583649 FADDQ13158 208 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 ZNF613Q6PF04 617 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 DHRS4L2Q6PKH6 230 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 METAP1DQ6UB28 335 aaPredicted RBP9.16□□□□□ -0.94
CASC3-208ENST00000583649 LIAT1Q6ZQX7 453 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 VMO1Q7Z5L0 202 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 CALHM3Q86XJ0 350 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 SLC30A8Q8IWU4 369 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 OR5AS1Q8N127 324 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 CLDN22Q8N7P3 220 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 CELF2-AS1Q8N7Q2 184 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 MNS1Q8NEH6 495 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 WFDC9Q8NEX5 89 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 OR10AD1Q8NGE0 317 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 RASD2Q96D21 266 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 APOPT1Q96IL0 206 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 ITCHQ96J02 903 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 DMRTB1Q96MA1 342 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 MRPL13Q9BYD1 178 aaKnown RBP9.16□□□□□ -0.94
CASC3-208ENST00000583649 WNT5BQ9H1J7 359 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 MEAF6Q9HAF1 191 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 TMEM100Q9NV29 134 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 MAB21L2Q9Y586 359 aa9.16□□□□□ -0.94
CASC3-208ENST00000583649 NPFFO15130 113 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 CHP2O43745 196 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 TRMUO75648 421 aaKnown RBP9.15□□□□□ -0.94
CASC3-208ENST00000583649 C1QCP02747 245 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 PF4P02776 101 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 LAP3P28838 519 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 HTR5AP47898 357 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 RAD23AP54725 363 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 NME5P56597 212 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 OR8B8Q15620 311 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 ZBTB37Q5TC79 503 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 LYPD2Q6UXB3 125 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 BTN2A1Q7KYR7 527 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 IFT20Q8IY31 132 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 LYG1Q8N1E2 194 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 PAPD5Q8NDF8 572 aaKnown RBP9.15□□□□□ -0.94
CASC3-208ENST00000583649 ASB10Q8WXI3 467 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 SEPHS2Q99611 448 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 CPPED1Q9BRF8 314 aaPredicted RBP9.15□□□□□ -0.94
CASC3-208ENST00000583649 ONECUT1Q9UBC0 465 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 TMCC3Q9ULS5 477 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 SIGLEC9Q9Y336 463 aa9.15□□□□□ -0.94
CASC3-208ENST00000583649 MEIOCA2RUB1 952 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 SMIM23A6NLE4 172 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 SLC2A10O95528 541 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 MSR1P21757 451 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 FPR3P25089 353 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 GATA4P43694 442 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 MVDP53602 400 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 UFM1P61960 85 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 ACSM1Q08AH1 577 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 NPTX1Q15818 432 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 WHAMMP3Q1A5X7 153 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 C6orf10Q5SRN2 563 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 NCR3LG1Q68D85 454 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 REEP3Q6NUK4 255 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 PCYOX1LQ8NBM8 494 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 OR51G2Q8NGK0 314 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 Q8TCH9 128 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 SLC7A13Q8TCU3 470 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 NABP1Q96AH0 204 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 MPP4Q96JB8 637 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 TEX37Q96LM6 180 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 HCAR1Q9BXC0 346 aa9.14□□□□□ -0.95
CASC3-208ENST00000583649 INIPQ9NRY2 104 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms