RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 KCNK7Q9Y2U2 307 aa4.55□□□□□ -1.68
SF3B3-214ENST00000572365 TRAV24A0A0B4J272 114 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 IGHV4-61A0A0C4DH41 118 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 DUXAA6NLW8 204 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 WASHC1A8K0Z3 465 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 C17orf51A8MQB3 221 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 C17orf105B2RV13 164 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 H0YAE9 185 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 MRPS14O60783 128 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 SH3BGRLO75368 114 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 PRKRAO75569 313 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 CCNKO75909 580 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 ANXA9O76027 345 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 TSHBP01222 138 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 IFNA14P01570 189 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 MYL2P10916 166 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 EFNA1P20827 205 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 ERP29P30040 261 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 IL2RGP31785 369 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 TALDO1P37837 337 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 WNT5AP41221 380 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 GRIA1P42261 906 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 MAGEA4P43358 317 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 CDH11P55287 796 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 MTCP1P56278 107 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 AP1S2P56377 157 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 NME5P56597 212 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 ARL16Q0P5N6 197 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 SELENBP1Q13228 472 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 GNA13Q14344 377 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 MORF4L2Q15014 288 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 TRADDQ15628 312 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 ZFP69Q49AA0 526 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 IQCCQ4KMZ1 466 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 LBHQ53QV2 105 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 FASTKD1Q53R41 847 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 TECRLQ5HYJ1 363 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 TOR1AIP1Q5JTV8 583 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 CTSL3PQ5NE16 218 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 CLVS2Q5SYC1 327 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 RSBN1Q5VWQ0 802 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 OR5M10Q6IEU7 315 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 CES3Q6UWW8 571 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 TMEM182Q6ZP80 229 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 PIWIL3Q7Z3Z3 882 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 MMD2Q8IY49 270 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 MFSD9Q8NBP5 474 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 OR4K1Q8NGD4 311 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 OR5T2Q8NGG2 359 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 OR5M1Q8NGP8 315 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 OR4L1Q8NH43 312 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 ZPLD1Q8TCW7 415 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 C10orf105Q8TEF2 133 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 PAQR8Q8TEZ7 354 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 PROX1Q92786 737 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 ST6GALNAC6Q969X2 333 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 SGK3Q96BR1 496 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 DUS3LQ96G46 650 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 FOXN4Q96NZ1 517 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 OPALINQ96PE5 141 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 GAL3ST4Q96RP7 486 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 RPF2Q9H7B2 306 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 RPRD1BQ9NQG5 326 aaKnown RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 GSN-AS1Q9NRJ2 163 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 FAM118AQ9NWS6 357 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 TEX10Q9NXF1 929 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 NINJ2Q9NZG7 142 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 CLCF1Q9UBD9 225 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 KCNG2Q9UJ96 466 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 POMPQ9Y244 141 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 ZNF175Q9Y473 711 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 RNF115Q9Y4L5 304 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 SLC22A7Q9Y694 548 aa4.54□□□□□ -1.68
SF3B3-214ENST00000572365 CHCHD2Q9Y6H1 151 aaPredicted RBP4.54□□□□□ -1.68
SF3B3-214ENST00000572365 KCNE1BA0A087WTH5 132 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 LOC100653049A0A140TA62 436 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 A0A1W2PRG6 482 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 DPRXA6NFQ7 191 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 OOEPA6NGQ2 149 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SLCO1B7G3V0H7 640 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 H3BMQ9 156 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 CDC7O00311 574 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 ARPC2O15144 300 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 GATCO43716 136 aaKnown RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 KRT34O76011 436 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SNX4O95219 450 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 OR5F1O95221 314 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 CGAP01215 116 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 OPN1LWP04000 364 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 HPNP05981 417 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SLC35G6P0C7Q6 338 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 SPP1P10451 314 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 ERGP11308 486 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 C4BPBP20851 252 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 IMPA1P29218 277 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 PTPN6P29350 595 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 RPL22P35268 128 aaKnown RBP4.53□□□□□ -1.68
SF3B3-214ENST00000572365 OR3A3P47888 321 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 VBP1P61758 197 aa4.53□□□□□ -1.68
SF3B3-214ENST00000572365 CRADDP78560 199 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms