RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 CCL2P13500 99 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 SLC25A16P16260 332 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 PDLIM4P50479 330 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 CRMP1Q14194 572 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 PCGF3Q3KNV8 242 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 UGT2A3Q6UWM9 527 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 CYB561A3Q8NBI2 242 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 ZNF540Q8NDQ6 660 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 OR4Q3Q8NH05 313 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 FAM168AQ92567 244 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 FOXN4Q96NZ1 517 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 ATF6BQ99941 703 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 MRPL37Q9BZE1 423 aaKnown RBP12□□□□□ -0.49
RPAIN-211ENST00000572174 FN3KQ9H479 309 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 NTN4Q9HB63 628 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 SLC25A19Q9HC21 320 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 DUSP13Q9UII6 198 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 GDF2Q9UK05 429 aaPredicted RBP12□□□□□ -0.49
RPAIN-211ENST00000572174 ORC6Q9Y5N6 252 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 LHFPL6Q9Y693 200 aa12□□□□□ -0.49
RPAIN-211ENST00000572174 ACANP16112 2415 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 LOC100509620A0A075B734 347 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 PRODHO43272 600 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 INHBBP09529 407 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 SPI1P17947 270 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 ENTPD1P49961 510 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 PPP1CBP62140 327 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 HIST1H3AP68431 136 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 CDK5Q00535 292 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 GINS1Q14691 196 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 HIST2H3PS2Q5TEC6 136 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 MBNL2Q5VZF2 373 aaKnown RBP11.99□□□□□ -0.49
RPAIN-211ENST00000572174 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 HIST2H3AQ71DI3 136 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-211ENST00000572174 HS3ST5Q8IZT8 346 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 PAQR4Q8N4S7 273 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-211ENST00000572174 OR6K6Q8NGW6 343 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 SPTSSAQ969W0 71 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 APOBEC3DQ96AK3 386 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-211ENST00000572174 COX4I2Q96KJ9 171 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 SORCS2Q96PQ0 1159 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 DDOQ99489 341 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 PITX2Q99697 317 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 SYT3Q9BQG1 590 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 NMNAT2Q9BZQ4 307 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 OR51B6Q9H340 312 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 CYB5R1Q9UHQ9 305 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 COMMD3-BMI1R4GMX3 469 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 TANC2Q9HCD6 1990 aa11.99□□□□□ -0.49
RPAIN-211ENST00000572174 LOC390937A0A1W2PQ73 354 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 RER1O15258 196 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 SURF4O15260 269 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 MPZL1O95297 269 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 IGHV3-13P01766 116 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 SCG5P05408 212 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 ADRA2AP08913 450 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 PRKACGP22612 351 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 IGFBP5P24593 272 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 SLC15A1P46059 708 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 CRISP1P54107 249 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 KPNB1Q14974 876 aaKnown RBP11.98□□□□□ -0.49
RPAIN-211ENST00000572174 MEP1BQ16820 701 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 TEX30Q5JUR7 227 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 SLC35D3Q5M8T2 416 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 SLC18B1Q6NT16 456 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 DNM1P46Q6ZS02 220 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 SHFQ7M4L6 423 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 OR9Q1Q8NGQ5 310 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 DIRC2Q96SL1 478 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 RBM4BQ9BQ04 359 aaKnown RBP11.98□□□□□ -0.49
RPAIN-211ENST00000572174 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 DLL4Q9NR61 685 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 GRIP1Q9Y3R0 1128 aa11.98□□□□□ -0.49
RPAIN-211ENST00000572174 YLPM1P49750 1951 aaKnown RBP11.98□□□□□ -0.49
RPAIN-211ENST00000572174 TMEM129A0AVI4 362 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 H7C1Q1 480 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 GLCEO94923 617 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 APOC1P02654 83 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 TFP02787 698 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 PYCR1P32322 319 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 GGT2P36268 569 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 WNT5AP41221 380 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 TPTEP56180 551 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 MRPS11P82912 194 aaKnown RBP11.97□□□□□ -0.49
RPAIN-211ENST00000572174 CCDC92Q53HC0 331 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-211ENST00000572174 ZNF362Q5T0B9 420 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-211ENST00000572174 LCN1P1Q5VSP4 162 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 KDM4DQ6B0I6 523 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 RHOUQ7L0Q8 258 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 ZNF101Q8IZC7 436 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 IQCF1Q8N6M8 205 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 SLC25A40Q8TBP6 338 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 KLF14Q8TD94 323 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-211ENST00000572174 PYDC1Q8WXC3 89 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 LRTOMTQ8WZ04 291 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 STMN2Q93045 179 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 OTULINQ96BN8 352 aa11.97□□□□□ -0.49
RPAIN-211ENST00000572174 MARS2Q96GW9 593 aaKnown RBP11.97□□□□□ -0.49
RPAIN-211ENST00000572174 INTS14Q96SY0 518 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms