RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PPA2Q9H2U2 334 aa7.16□□□□□ -1.26
SMG1-216ENST00000569122 MMADHCQ9H3L0 296 aaPredicted RBP7.16□□□□□ -1.26
SMG1-216ENST00000569122 CNTD2Q9H8S5 307 aa7.16□□□□□ -1.26
SMG1-216ENST00000569122 ZNRD1Q9P1U0 126 aa7.16□□□□□ -1.26
SMG1-216ENST00000569122 K7EIL1 84 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 FBXO24O75426 580 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 TRMUO75648 421 aaKnown RBP7.15□□□□□ -1.26
SMG1-216ENST00000569122 SLC6A2P23975 617 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 CDAP32320 146 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 GATA4P43694 442 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 RGS6P49758 472 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 RPL14P50914 215 aaKnown RBP7.15□□□□□ -1.26
SMG1-216ENST00000569122 ARF6P62330 175 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 RGNQ15493 299 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 NPTX1Q15818 432 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 NSUN5P1Q3KNT7 163 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 CDONQ4KMG0 1287 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 REEP3Q6NUK4 255 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 PGBD2Q6P3X8 592 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 METAP1DQ6UB28 335 aaPredicted RBP7.15□□□□□ -1.26
SMG1-216ENST00000569122 LINC00114Q6XXX2 140 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 MOGAT3Q86VF5 341 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 SLC30A8Q8IWU4 369 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 KLHDC1Q8N7A1 406 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 C11orf44Q8N8P7 122 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 PCYOX1LQ8NBM8 494 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 Q8TCH9 128 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 NABP1Q96AH0 204 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 RASD2Q96D21 266 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 MPP4Q96JB8 637 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 TEX37Q96LM6 180 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 GPR61Q9BZJ8 451 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 SIRPDQ9H106 197 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 TMEM100Q9NV29 134 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 ZMAT5Q9UDW3 170 aaKnown RBP7.15□□□□□ -1.26
SMG1-216ENST00000569122 NOP16Q9Y3C1 178 aaKnown RBP7.15□□□□□ -1.26
SMG1-216ENST00000569122 RAP2CQ9Y3L5 183 aa7.15□□□□□ -1.26
SMG1-216ENST00000569122 TRAV38-1A0A0B4J264 116 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 ELOVL7A1L3X0 281 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 NPIPB13A6NJU9 1138 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 SMIM23A6NLE4 172 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 NPIPB4C9JG80 1138 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 SLC22A3O75751 556 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 F13BP05160 661 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 BPGMP07738 259 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 ASAH2BP0C7U1 165 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 BMP2P12643 396 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 MSR1P21757 451 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 LAP3P28838 519 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 NME5P56597 212 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 CD47Q08722 323 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 SCRN3Q0VDG4 424 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 INTS11Q5TA45 600 aaKnown RBP7.14□□□□□ -1.27
SMG1-216ENST00000569122 LYPD2Q6UXB3 125 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 CCBE1Q6UXH8 406 aaPredicted RBP7.14□□□□□ -1.27
SMG1-216ENST00000569122 LIAT1Q6ZQX7 453 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 C1orf122Q6ZSJ8 110 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 CALHM3Q86XJ0 350 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 CLDN22Q8N7P3 220 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 ASB10Q8WXI3 467 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 NSMAFQ92636 917 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 MCHR1Q99705 422 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 ALG12Q9BV10 488 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 TXLNGYQ9BZA5 131 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 NPFFR1Q9GZQ6 430 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 INIPQ9NRY2 104 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 AIG1Q9NVV5 245 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 FOXJ3Q9UPW0 622 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 STARD10Q9Y365 291 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 UGT2A1Q9Y4X1 527 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 MAB21L2Q9Y586 359 aa7.14□□□□□ -1.27
SMG1-216ENST00000569122 LGALS8O00214 317 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 CLIC1O00299 241 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 ADAM20O43506 726 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 SLC2A10O95528 541 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 SERPINE1P05121 402 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 VSIG10L2P0DP72 767 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 IDO1P14902 403 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 PAICSP22234 425 aaKnown RBP7.13□□□□□ -1.27
SMG1-216ENST00000569122 PPIBP23284 216 aaKnown RBP7.13□□□□□ -1.27
SMG1-216ENST00000569122 ETV4P43268 484 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 HTR5AP47898 357 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 UGT2B15P54855 530 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 ABCE1P61221 599 aaKnown RBP7.13□□□□□ -1.27
SMG1-216ENST00000569122 SLC35A2P78381 396 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 CDK6Q00534 326 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 ACSM1Q08AH1 577 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 HNRNPA0Q13151 305 aaKnown RBP7.13□□□□□ -1.27
SMG1-216ENST00000569122 C6orf10Q5SRN2 563 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 SLC25A47Q6Q0C1 308 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 FBXW12Q6X9E4 464 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 BTN2A1Q7KYR7 527 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 ARMC8Q8IUR7 673 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 OR5AS1Q8N127 324 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 ZNF781Q8N8C0 355 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 PLPP7Q8NBV4 271 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 PAPD5Q8NDF8 572 aaKnown RBP7.13□□□□□ -1.27
SMG1-216ENST00000569122 OR10AD1Q8NGE0 317 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 TCP10LQ8TDR4 215 aa7.13□□□□□ -1.27
SMG1-216ENST00000569122 ANP32BQ92688 251 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms