RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PTP4A1Q93096 173 aa13.52□□□□□ -0.25
USB1-208ENST00000563207 ZNF75AQ96N20 296 aa13.52□□□□□ -0.25
USB1-208ENST00000563207 SORCS2Q96PQ0 1159 aa13.52□□□□□ -0.25
USB1-208ENST00000563207 ZNF416Q9BWM5 594 aa13.52□□□□□ -0.25
USB1-208ENST00000563207 VCXQ9H320 206 aa13.52□□□□□ -0.25
USB1-208ENST00000563207 SMPD3Q9NY59 655 aaPredicted RBP13.52□□□□□ -0.25
USB1-208ENST00000563207 IQCMA0A1B0GVH7 501 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 E9PQ18 207 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 GLCEO94923 617 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 HLA-DQA2P01906 255 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 CRYAAP02489 173 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 CECR9P0C854 216 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 ZNF823P16415 610 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 ZNF14P17017 642 aaPredicted RBP13.51□□□□□ -0.25
USB1-208ENST00000563207 POLR2IP36954 125 aaKnown RBP13.51□□□□□ -0.25
USB1-208ENST00000563207 TEKQ02763 1124 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 SCRN3Q0VDG4 424 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 ENDOGQ14249 297 aaKnown RBP13.51□□□□□ -0.25
USB1-208ENST00000563207 TMEM249Q2WGJ8 235 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 PLBD1Q6P4A8 553 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 CLEC2AQ6UVW9 174 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 CXXC5Q7LFL8 322 aaKnown RBP13.51□□□□□ -0.25
USB1-208ENST00000563207 CPOQ8IVL8 374 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 OR8J1Q8NGP2 316 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 OR1J2Q8NGS2 313 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 TMEM163Q8TC26 289 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 C11orf40Q8WZ69 217 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 KCNS3Q9BQ31 491 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 TOR3AQ9H497 397 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 HINT3Q9NQE9 182 aaKnown RBP13.51□□□□□ -0.25
USB1-208ENST00000563207 MXRA5Q9NR99 2828 aa13.51□□□□□ -0.25
USB1-208ENST00000563207 FAM183AA6NL82 134 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 TLX2O43763 284 aaPredicted RBP13.5□□□□□ -0.25
USB1-208ENST00000563207 SNAP29O95721 258 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 SCG5P05408 212 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 COX5BP10606 129 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 ZNF32P17041 273 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 PEX2P28328 305 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 PYCR1P32322 319 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 GGT2P36268 569 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 IDH3GP51553 393 aaPredicted RBP13.5□□□□□ -0.25
USB1-208ENST00000563207 HGFACQ04756 655 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 LRRC36Q1X8D7 754 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 TEX30Q5JUR7 227 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 C6orf52Q5T4I8 152 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 LPCAT4Q643R3 524 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 ZCCHC24Q8N2G6 241 aaKnown RBP13.5□□□□□ -0.25
USB1-208ENST00000563207 TCEANCQ8N8B7 351 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 GJC3Q8NFK1 279 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 OR9Q1Q8NGQ5 310 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 FGFBP3Q8TAT2 258 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 FAM168AQ92567 244 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 OTULINQ96BN8 352 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 CDADC1Q9BWV3 514 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 EMC7Q9NPA0 242 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 H2AFY2Q9P0M6 372 aaPredicted RBP13.5□□□□□ -0.25
USB1-208ENST00000563207 NDRG4Q9ULP0 352 aaKnown RBP13.5□□□□□ -0.25
USB1-208ENST00000563207 SVEP1Q4LDE5 3571 aa13.5□□□□□ -0.25
USB1-208ENST00000563207 A8MV72 311 aaPredicted RBP13.49□□□□□ -0.25
USB1-208ENST00000563207 SLC16A6O15403 523 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 PRKYO43930 277 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 MPZL1O95297 269 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 F12P00748 615 aaPredicted RBP13.49□□□□□ -0.25
USB1-208ENST00000563207 TFP02787 698 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 PATE4P0C8F1 98 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 EFNA4P52798 201 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 PSG4Q00888 419 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 NAAAQ02083 359 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 LOXL1Q08397 574 aaPredicted RBP13.49□□□□□ -0.25
USB1-208ENST00000563207 ADIPOQQ15848 244 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 ZIK1Q3SY52 487 aaPredicted RBP13.49□□□□□ -0.25
USB1-208ENST00000563207 LINC01590Q5TEZ4 76 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 NXNL2Q5VZ03 156 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 UGT2A3Q6UWM9 527 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 GID4Q8IVV7 300 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 GALNT4Q8N4A0 578 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 ZNF555Q8NEP9 628 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 OR4F15Q8NGB8 312 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 OR6K6Q8NGW6 343 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 FOXN4Q96NZ1 517 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 MBOAT4Q96T53 435 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 PITX2Q99697 317 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 OR2H1Q9GZK4 316 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 OR51V1Q9H2C8 321 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 VCX3BQ9H321 246 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 MARCH7Q9H992 704 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 NOX3Q9HBY0 568 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 CA10Q9NS85 328 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 MRPL22Q9NWU5 206 aaKnown RBP13.49□□□□□ -0.25
USB1-208ENST00000563207 NKX1-2Q9UD57 310 aaPredicted RBP13.49□□□□□ -0.25
USB1-208ENST00000563207 CYB5R1Q9UHQ9 305 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 ATPIF1Q9UII2 106 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 POLR1DQ9Y2S0 133 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 COL6A5A8TX70 2615 aa13.49□□□□□ -0.25
USB1-208ENST00000563207 ATRQ13535 2644 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 LOC100130705A0A1B0GUX0 176 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 SLC22A31A6NKX4 558 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 H0YJX3 145 aa13.48□□□□□ -0.25
USB1-208ENST00000563207 MPZL2O60487 215 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms