RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 LINGO2Q7L985 606 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 PIWIL3Q7Z3Z3 882 aaKnown RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 NKAIN4Q8IVV8 208 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 WDFY1Q8IWB7 410 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 UBQLNLQ8IYU4 475 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 OFCC1Q8IZS5 231 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 EID3Q8N140 333 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 CADM2Q8N3J6 435 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RELL2Q8NC24 303 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 ZNF485Q8NCK3 441 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 OR2AK2Q8NG84 335 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ZNF563Q8TA94 476 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 VANGL1Q8TAA9 524 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 FNDC9Q8TBE3 224 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ADAMTS16Q8TE57 1224 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RNF128Q8TEB7 428 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 OSTF1Q92882 214 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TAAR8Q969N4 342 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 SLCO4A1Q96BD0 722 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ASB9Q96DX5 294 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 DTNBP1Q96EV8 351 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 SLC41A3Q96GZ6 507 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ZNF300Q96RE9 604 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 PSD2Q9BQI7 771 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TMEM43Q9BTV4 400 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 THTPAQ9BU02 230 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 POTEKPQ9BYX7 375 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 POLR2J2Q9GZM3 115 aaKnown RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 POLR2J3Q9H1A7 115 aaKnown RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 MUC13Q9H3R2 512 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 EXO5Q9H790 373 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RNF122Q9H9V4 155 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 MEPEQ9NQ76 525 aaPredicted RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 SEC14L4Q9UDX3 406 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 SH3BGRL2Q9UJC5 107 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 CAMK2AQ9UQM7 478 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 POMPQ9Y244 141 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 RNF6Q9Y252 685 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 TRAPPC4Q9Y296 219 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 SH3GLB1Q9Y371 365 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 ZNF175Q9Y473 711 aa3.96□□□□□ -1.78
SMG1-206ENST00000562668 UTP20O75691 2785 aaKnown RBP3.96□□□□□ -1.78
SMG1-206ENST00000562668 IGKV3D-15A0A087WSY6 115 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 IGHV3-15A0A0B4J1V0 119 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 A0A1B0GU03 582 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 A0A1W2PNV4 684 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 TCRBV3S1A0A5B6 114 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 TRAPPC13A5PLN9 417 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 SLC22A20A6NK97 555 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 CPSF4LA6NMK7 179 aaKnown RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 A8MVM7 634 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 C19orf84I3L1E1 186 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 GYG2O15488 501 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 CYTIPO60759 359 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 SS18L1O75177 396 aaPredicted RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 ATP5HO75947 161 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 ZNF682O95780 498 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 CLDN1O95832 211 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 IGF2P01344 180 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 IFNA14P01570 189 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 ASAH2BP0C7U1 165 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 THRBP10828 461 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 PNMTP11086 282 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 UQCRBP14927 111 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 FKBP2P26885 142 aaKnown RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 OPRM1P35372 400 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 CARD18P57730 90 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 COPZ1P61923 177 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 PDK3Q15120 406 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 PON3Q15166 354 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 MS4A18Q3C1V0 323 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 TMEM30BQ3MIR4 351 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 DNAL1Q4LDG9 190 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 C1orf140Q5VVS0 124 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 HBMQ6B0K9 141 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 KRTAP5-4Q6L8H1 288 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 SLC46A3Q7Z3Q1 461 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 RANBP3LQ86VV4 465 aaPredicted RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 CCDC71Q8IV32 467 aaPredicted RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 RNF113BQ8IZP6 322 aaKnown RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 TMEM99Q8N816 258 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 ZIC4Q8N9L1 334 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 PAPD5Q8NDF8 572 aaKnown RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 ATP6V1C2Q8NEY4 427 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 OR4C15Q8NGM1 316 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 OR6S1Q8NH40 331 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 LILRB4Q8NHJ6 448 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 MFSD8Q8NHS3 518 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 SLC7A13Q8TCU3 470 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 SLC26A7Q8TE54 656 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 DNAJA4Q8WW22 397 aaPredicted RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 LIPHQ8WWY8 451 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 GEMIN6Q8WXD5 167 aaKnown RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 ROBO4Q8WZ75 1007 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 SMPDL3BQ92485 455 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 PROX1Q92786 737 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 CPNE4Q96A23 557 aaPredicted RBP3.95□□□□□ -1.78
SMG1-206ENST00000562668 FAM162AQ96A26 154 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 STARD4Q96DR4 205 aa3.95□□□□□ -1.78
SMG1-206ENST00000562668 DNAJA3Q96EY1 480 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms