RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 SLC35F3Q8IY50 421 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 ZNF595Q8IYB9 648 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CDK20Q8IZL9 346 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR8H3Q8N146 312 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CA13Q8N1Q1 262 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 C12orf76Q8N812 135 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 COX18Q8N8Q8 333 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 LRRC75AQ8NAA5 344 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CYB561A3Q8NBI2 242 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CAMKVQ8NCB2 501 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 NPEPL1Q8NDH3 523 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SDR9C7Q8NEX9 313 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR4E2Q8NGC2 313 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR6C4Q8NGE1 309 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR4C16Q8NGL9 310 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR2T35Q8NGX2 323 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR6N1Q8NGY5 312 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR52I2Q8NH67 350 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR4C6Q8NH72 309 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 ZCCHC10Q8TBK6 192 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SPPL3Q8TCT6 385 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SMAP2Q8WU79 429 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 POF1BQ8WVV4 589 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SMARCD2Q92925 531 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 PNPLA2Q96AD5 504 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SLC22A18Q96BI1 424 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 TRIM43Q96BQ3 446 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 ORAI1Q96D31 301 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 ZMYND19Q96E35 227 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 OMA1Q96E52 524 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SGTBQ96EQ0 304 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 ELMOD3Q96FG2 381 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 ART5Q96L15 291 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 KLHL15Q96M94 604 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 VSTM2LQ96N03 204 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 DEFB118Q96PH6 123 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR2A5Q96R48 311 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 PDCD1LG2Q9BQ51 273 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 MESP1Q9BRJ9 268 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SEC22CQ9BRL7 303 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 APOOQ9BUR5 198 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 GSDMCQ9BYG8 508 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 TRIM2Q9C040 744 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR51V1Q9H2C8 321 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 PPA2Q9H2U2 334 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 C1orf198Q9H425 327 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 METTL17Q9H7H0 456 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 TMEM27Q9HBJ8 222 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 GPN1Q9HCN4 374 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 FGF22Q9HCT0 170 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 MYOZ1Q9NP98 299 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 ADAP2Q9NPF8 381 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 NOX4Q9NPH5 578 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 MKKSQ9NPJ1 570 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 EXOSC3Q9NQT5 275 aaKnown RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 SLC17A5Q9NRA2 495 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CA10Q9NS85 328 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 C2orf42Q9NWW7 574 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SDHAF2Q9NX18 166 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 MTFP1Q9UDX5 166 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR5V1Q9UGF6 321 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OPN4Q9UHM6 478 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 GLS2Q9UI32 602 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 ZNF107Q9UII5 783 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 KCNG2Q9UJ96 466 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 FOXJ3Q9UPW0 622 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 PLEKHA6Q9Y2H5 1048 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SLC6A5Q9Y345 797 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 MRPS2Q9Y399 296 aaKnown RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 ZNF337Q9Y3M9 751 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 SPEF1Q9Y4P9 236 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 OR1A2Q9Y585 309 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CLDN16Q9Y5I7 305 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 KLF2Q9Y5W3 355 aaPredicted RBP2.2□□□□□ -2.06
SPG11-223ENST00000560858 V9GY05 133 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CEP192Q8TEP8 1941 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 PCNX3Q9H6A9 2034 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 CEP350Q5VT06 3117 aa2.2□□□□□ -2.06
SPG11-223ENST00000560858 TDRD6O60522 2096 aaKnown RBP2.19□□□□□ -2.06
SPG11-223ENST00000560858 TRAV8-7A0A075B6U6 113 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TBC1D3IA0A087WXS9 549 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TRAV14DV4A0A0A6YYC5 116 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 A0A0A6YYH2 397 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 A0A0J9YY10 115 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SLC22A23A1A5C7 686 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 LINC01553A4QN01 128 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR6C68A6NDL8 312 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 GGT3PA6NGU5 568 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 ZNF860A6NHJ4 632 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 A6NJ64 397 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 LRRC72A6NJI9 287 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 TMEM212A6NML5 194 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 OR4C45A6NMZ5 311 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 H3BUI4 141 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 PYCARD-AS1I3L0S3 204 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 L7N2F9 121 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SULT1C2O00338 296 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 SLC17A2O00624 439 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 PHYHO14832 338 aa2.19□□□□□ -2.06
SPG11-223ENST00000560858 LDLRAD4O15165 306 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms