RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 CA7P43166 264 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 RIDAP52758 137 aaKnown RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 CASP6P55212 293 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 PCBD1P61457 104 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 ANKRD13BQ86YJ7 626 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 BCL2L2Q92843 193 aaPredicted RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 DMRTA2Q96SC8 542 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 OPN3Q9H1Y3 402 aaPredicted RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 KCNN2Q9H2S1 579 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 DDX28Q9NUL7 540 aaKnown RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 ZNF224Q9NZL3 707 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 Q9UFV3 132 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 EPG5Q9HCE0 2579 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 A0A096LPE4 126 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 PNMA8CA0A1B0GUJ8 204 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 A0A1W2PPZ6 126 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 PLPP2O43688 288 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 RPP14O95059 124 aaKnown RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 MMP7P09237 267 aaPredicted RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 H2BFMP0C1H6 154 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 ZNF32P17041 273 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 OPRM1P35372 400 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 TGFBR3Q03167 851 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 SCRN3Q0VDG4 424 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 CCDC92Q53HC0 331 aaPredicted RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 DMKNQ6E0U4 476 aaPredicted RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 OR7E24Q6IFN5 339 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 SLC16A12Q6ZSM3 486 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 P2RY8Q86VZ1 359 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 FGFBP3Q8TAT2 258 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 RPS4Y2Q8TD47 263 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 NAA50Q9GZZ1 169 aaKnown RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 ZNF629Q9UEG4 869 aaPredicted RBP10.67□□□□□ -0.7
HERC1-205ENST00000559886 TIMM10BQ9Y5J6 103 aa10.67□□□□□ -0.7
HERC1-205ENST00000559886 TRGV8A0A0C4DH27 118 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 DCTDP32321 178 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 TMBIM6P55061 237 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 CDK5R1Q15078 307 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 TMEM211Q6ICI0 200 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 FDX2Q6P4F2 183 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 BEND4Q6ZU67 534 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.66□□□□□ -0.7
HERC1-205ENST00000559886 ZNF433Q8N7K0 673 aaPredicted RBP10.66□□□□□ -0.7
HERC1-205ENST00000559886 ZNF420Q8TAQ5 688 aaPredicted RBP10.66□□□□□ -0.7
HERC1-205ENST00000559886 HSD17B8Q92506 261 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 DGCR14Q96DF8 476 aaKnown RBP10.66□□□□□ -0.7
HERC1-205ENST00000559886 BOD1Q96IK1 185 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 ENPP5Q9UJA9 477 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 SLC5A6Q9Y289 635 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 MEMO1Q9Y316 297 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
HERC1-205ENST00000559886 SRSF10O75494 262 aaKnown RBP10.66□□□□□ -0.7
HERC1-205ENST00000559886 PATE4P0C8F1 98 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 GADD45AP24522 165 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 NANOS3P60323 173 aaKnown RBP10.66□□□□□ -0.7
HERC1-205ENST00000559886 P2RY6Q15077 328 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 SLC36A2Q495M3 483 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 ELFN2Q5R3F8 820 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 ATF6BQ99941 703 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 NIPAL2Q9H841 368 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 PLEK2Q9NYT0 353 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 FBXL3Q9UKT7 428 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 OSGIN2Q9Y236 505 aa10.66□□□□□ -0.7
HERC1-205ENST00000559886 TRBV2A0A0J9YWF9 115 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 CCDC160A6NGH7 325 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 ZNF701M0R085 212 aaPredicted RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 MSTNO14793 375 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 SGCEO43556 437 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 LYZL6O75951 148 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 CD1AP06126 327 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 CD53P19397 219 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 GABRA5P31644 462 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 PSG4Q00888 419 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 RAB35Q15286 201 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 ARL9Q6T311 187 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 NCCRP1Q6ZVX7 275 aaPredicted RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 DPPA2Q7Z7J5 298 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 C1orf162Q8NEQ5 155 aaPredicted RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 OR2G2Q8NGZ5 317 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 RAB2BQ8WUD1 216 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 ISOC1Q96CN7 298 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 SMIM19Q96E16 107 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 PGLYRP3Q96LB9 341 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 DOK1Q99704 481 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 OR2H1Q9GZK4 316 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 HDHD2Q9H0R4 259 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 PIGMQ9H3S5 423 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 FRRS1LQ9P0K9 344 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 RSL24D1Q9UHA3 163 aaKnown RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 LRRTM2O43300 516 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 SYNGR3O43761 229 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 GABARAPO95166 117 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 PNPP00491 289 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 PSMA1P25786 263 aaKnown RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 GRB2P62993 217 aaKnown RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 ALKBH1Q13686 389 aaKnown RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 ESPL1Q14674 2120 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 TAF13Q15543 124 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 GABRA6Q16445 453 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms