RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PTAFRP25105 342 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 HTR1FP30939 366 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 HSPA13P48723 471 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 NAAAQ02083 359 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 ZNF91Q05481 1191 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 IL18R1Q13478 541 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 RAB35Q15286 201 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 TAF13Q15543 124 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 OCLNQ16625 522 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 TBC1D28Q2M2D7 210 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 ELFN2Q5R3F8 820 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 MEDAGQ5VYS4 303 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 VASH1Q7L8A9 365 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-208ENST00000558970 SLC16A9Q7RTY1 509 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 DPPA2Q7Z7J5 298 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 SLC35F2Q8IXU6 374 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 ALDH16A1Q8IZ83 802 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 OR10H4Q8NGA5 316 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 SLAMF6Q96DU3 332 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 Q96MT0 163 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 ZNF184Q99676 751 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-208ENST00000558970 RHNO1Q9BSD3 238 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 CDH20Q9HBT6 801 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 CRNNQ9UBG3 495 aaPredicted RBP10.78□□□□□ -0.68
GABPB1-208ENST00000558970 WARS2Q9UGM6 360 aaKnown RBP10.78□□□□□ -0.68
GABPB1-208ENST00000558970 LAMP5Q9UJQ1 280 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.78□□□□□ -0.68
GABPB1-208ENST00000558970 COPS3Q9UNS2 423 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 RNF115Q9Y4L5 304 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 N6AMT1Q9Y5N5 214 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 ATP23Q9Y6H3 246 aa10.78□□□□□ -0.68
GABPB1-208ENST00000558970 LOC100509620A0A075B734 347 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 IGHV2OR16-5A0A0B4J2B6 119 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 A0A1W2PPR1 153 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 F5H5K5 113 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 MAGEB4O15481 346 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-208ENST00000558970 SYNGR3O43761 229 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 LYNP07948 512 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 SBK2P0C263 348 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 LOXP28300 417 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-208ENST00000558970 MTNR1AP48039 350 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 GDI2P50395 445 aaKnown RBP10.77□□□□□ -0.69
GABPB1-208ENST00000558970 ISL1P61371 349 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 GGTLC2Q14390 218 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 LRRN1Q6UXK5 716 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF704Q6ZNC4 412 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-208ENST00000558970 USP51Q70EK9 711 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 THAP5Q7Z6K1 395 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 SYT9Q86SS6 491 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 CDC20BQ86Y33 519 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF295-AS1Q8N0V1 137 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 OR10S1Q8NGN2 331 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 OR1F12Q8NHA8 337 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 OTOSQ8NHW6 89 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 ATF6BQ99941 703 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 COPS4Q9BT78 406 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 ABHD6Q9BV23 337 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 CLEC4MQ9H2X3 399 aaPredicted RBP10.77□□□□□ -0.69
GABPB1-208ENST00000558970 C1orf198Q9H425 327 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 MARCH7Q9H992 704 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 UBTD1Q9HAC8 227 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 GRIP1Q9Y3R0 1128 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 POLQO75417 2590 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 PKDREJQ9NTG1 2253 aa10.77□□□□□ -0.69
GABPB1-208ENST00000558970 ANKHD1Q8IWZ3 2542 aaKnown RBP10.77□□□□□ -0.69
GABPB1-208ENST00000558970 SNTNA6NMZ2 147 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 XPNPEP2O43895 674 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 FAM20BO75063 409 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 PTHP01270 115 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 PRF1P14222 555 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 SLC6A9P48067 706 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 PRKXP51817 358 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 NR1H2P55055 460 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 CXCR4P61073 352 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 ERVS71-1P61550 626 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 HGFACQ04756 655 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 CDK5R2Q13319 367 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 SNTB2Q13425 540 aaKnown RBP10.76□□□□□ -0.69
GABPB1-208ENST00000558970 DAZAP2Q15038 168 aaPredicted RBP10.76□□□□□ -0.69
GABPB1-208ENST00000558970 PLEKHG7Q6ZR37 379 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 SSX8Q7RTT4 187 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 SSX6Q7RTT6 188 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 BPIFB6Q8NFQ5 453 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 ST7LQ8TDW4 575 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 LGALS12Q96DT0 336 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 HDHD2Q9H0R4 259 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 BRD7Q9NPI1 651 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 PNRC2Q9NPJ4 139 aaKnown RBP10.76□□□□□ -0.69
GABPB1-208ENST00000558970 IKZF2Q9UKS7 526 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 FBXL3Q9UKT7 428 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 RAB26Q9ULW5 256 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 FZR1Q9UM11 496 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 PCDHGB5Q9Y5G0 923 aa10.76□□□□□ -0.69
GABPB1-208ENST00000558970 OR6C6A6NF89 314 aa10.75□□□□□ -0.69
GABPB1-208ENST00000558970 PRR32B1ATL7 298 aa10.75□□□□□ -0.69
GABPB1-208ENST00000558970 SHISA9B4DS77 424 aa10.75□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF878C9JN71 531 aa10.75□□□□□ -0.69
GABPB1-208ENST00000558970 ZNF670-ZNF695F2Z2N8 137 aa10.75□□□□□ -0.69
GABPB1-208ENST00000558970 GPRIN2O60269 458 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms