RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OR6C6A6NF89 314 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 H7C417 338 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ABHD16AO95870 558 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 IGHV4-39P01824 125 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 GGT2P36268 569 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 WNT5AP41221 380 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 RPS27P42677 84 aaKnown RBP10.63□□□□□ -0.71
SMAD3-205ENST00000558428 BLVRAP53004 296 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ERVS71-1P61550 626 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 HIST1H3AP68431 136 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 PPP2R2BQ00005 443 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 KLHL12Q53G59 568 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ELFN2Q5R3F8 820 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 HIST2H3PS2Q5TEC6 136 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 SLC18B1Q6NT16 456 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 PLBD1Q6P4A8 553 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 TMEM154Q6P9G4 183 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ARL9Q6T311 187 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 PRSS57Q6UWY2 283 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 UNQ6126/PRO20091Q6UXV3 157 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 CFAP77Q6ZQR2 320 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 HIST2H3AQ71DI3 136 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ZNF101Q8IZC7 436 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ZNF511Q8NB15 262 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 OR1J1Q8NGS3 322 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 OR1F12Q8NHA8 337 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ABHD4Q8TB40 342 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 SLC7A6Q92536 515 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 PTP4A1Q93096 173 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 C4orf45Q96LM5 186 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 VRK1Q99986 396 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-205ENST00000558428 RBM4BQ9BQ04 359 aaKnown RBP10.63□□□□□ -0.71
SMAD3-205ENST00000558428 SYT3Q9BQG1 590 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 OSBPL10Q9BXB5 764 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 PRRG3Q9BZD7 231 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 HDHD2Q9H0R4 259 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 WDR76Q9H967 626 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ELOVL3Q9HB03 270 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 DYNLRB1Q9NP97 96 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 HINT3Q9NQE9 182 aaKnown RBP10.63□□□□□ -0.71
SMAD3-205ENST00000558428 CYB5R1Q9UHQ9 305 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ATPIF1Q9UII2 106 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 TMEFF2Q9UIK5 374 aaPredicted RBP10.63□□□□□ -0.71
SMAD3-205ENST00000558428 GRIP1Q9Y3R0 1128 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 HIVEP1P15822 2718 aa10.63□□□□□ -0.71
SMAD3-205ENST00000558428 ACANP16112 2415 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 A0A1W2PPW3 197 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 ZAR1LA6NP61 321 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 ANKRD65E5RJM6 399 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 GLCEO94923 617 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 SPARCP09486 303 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 EPHA2P29317 976 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 EVX1P49640 407 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 ENTPD1P49961 510 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 SELENOVP59797 346 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 SPATA46Q5T0L3 261 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 LINC01590Q5TEZ4 76 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 RFPL4BQ6ZWI9 263 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 CXXC5Q7LFL8 322 aaKnown RBP10.62□□□□□ -0.71
SMAD3-205ENST00000558428 LRP11Q86VZ4 500 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 TGIF2LYQ8IUE0 185 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 CPOQ8IVL8 374 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 SYNPRQ8TBG9 265 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 Q96MF0 132 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 PITX2Q99697 317 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 DOK1Q99704 481 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 COQ7Q99807 217 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 RIBC2Q9H4K1 309 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 BARX1Q9HBU1 254 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-205ENST00000558428 DUSP13Q9UII6 198 aa10.62□□□□□ -0.71
SMAD3-205ENST00000558428 FBXO9Q9UK97 447 aaPredicted RBP10.62□□□□□ -0.71
SMAD3-205ENST00000558428 FLNAP21333 2647 aaKnown RBP10.62□□□□□ -0.71
SMAD3-205ENST00000558428 M0R233 179 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ZNF593O00488 134 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-205ENST00000558428 EI24O14681 340 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 PRODHO43272 600 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 SSX4O60224 188 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ICMTO60725 284 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 BAG2O95816 211 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 CLPTM1O96005 669 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 NGFP01138 241 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 DBHP09172 617 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 PSKH1P11801 424 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ZNF250P15622 560 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 GSTT1P30711 240 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 PPOXP50336 477 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 NUDT6P53370 316 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
SMAD3-205ENST00000558428 RPS7P62081 194 aaKnown RBP10.61□□□□□ -0.71
SMAD3-205ENST00000558428 PPP1CBP62140 327 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ZNF718Q3SXZ3 478 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 SLX4IPQ5VYV7 408 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 DCXRQ7Z4W1 244 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ERI1Q8IV48 349 aaKnown RBP10.61□□□□□ -0.71
SMAD3-205ENST00000558428 C1orf174Q8IYL3 243 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 PQLC1Q8N2U9 271 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 BBS1Q8NFJ9 593 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 OR6N2Q8NGY6 317 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 SLC25A40Q8TBP6 338 aa10.61□□□□□ -0.71
SMAD3-205ENST00000558428 ZMYND19Q96E35 227 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms