RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 RFPL4BQ6ZWI9 263 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 SYT9Q86SS6 491 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 LDLRAD3Q86YD5 345 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 DTX3Q8N9I9 347 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 PNLDC1Q8NA58 520 aaKnown RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 SPERTQ8NA61 448 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 OR4S1Q8NGB4 309 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ZNF420Q8TAQ5 688 aaPredicted RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 NPRL2Q8WTW4 380 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 MAL2Q969L2 176 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 WWC2-AS2Q96NR7 200 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 WDFY2Q96P53 400 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 RBP7Q96R05 134 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 MCHR1Q99705 422 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 WACQ9BTA9 647 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 OR2H1Q9GZK4 316 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 WNT5BQ9H1J7 359 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 MEAF6Q9HAF1 191 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 SMURF2Q9HAU4 748 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 SLCO1B3Q9NPD5 702 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 AIG1Q9NVV5 245 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ERVK-18Q9QC07 812 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 FBLN5Q9UBX5 448 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 ZNF229Q9UJW7 825 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 NDRG4Q9ULP0 352 aaKnown RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 TMA7Q9Y2S6 64 aaKnown RBP4.3□□□□□ -1.72
SPG11-208ENST00000558155 USH1CQ9Y6N9 552 aa4.3□□□□□ -1.72
SPG11-208ENST00000558155 WDR91A4D1P6 747 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 C12orf71A8MTZ7 269 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 RNASEK-C17orf49H0YIS7 233 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 BIRC5O15392 142 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 NDUFA2O43678 99 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 CHP2O43745 196 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 TPST2O60704 377 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 CST2P09228 141 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 ALDOCP09972 364 aaKnown RBP4.29□□□□□ -1.72
SPG11-208ENST00000558155 ASAH2BP0C7U1 165 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 COX5BP10606 129 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 IDO1P14902 403 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 RAC2P15153 192 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 FUT1P19526 365 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 CD33P20138 364 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 SLC6A2P23975 617 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 LAP3P28838 519 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 EPHA3P29320 983 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 GABRA5P31644 462 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 UGT2B15P54855 530 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 STX3Q13277 289 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 NPTX1Q15818 432 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 C4orf46Q504U0 113 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 DEFB121Q5J5C9 76 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 C6orf10Q5SRN2 563 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 GCNT6Q5T4J0 391 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 SLC35E4Q6ICL7 350 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 SLC25A47Q6Q0C1 308 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 LYPD2Q6UXB3 125 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 ZNF841Q6ZN19 808 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 NANOGNBQ7Z5D8 188 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 ARMC8Q8IUR7 673 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 SLC30A8Q8IWU4 369 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 C17orf53Q8N3J3 647 aaPredicted RBP4.29□□□□□ -1.72
SPG11-208ENST00000558155 EIF1ADQ8N9N8 165 aaKnown RBP4.29□□□□□ -1.72
SPG11-208ENST00000558155 NOXO1Q8NFA2 376 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 OR8G5Q8NG78 346 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 OR5L1Q8NGL2 311 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 OR11L1Q8NGX0 322 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 NFKBIDQ8NI38 313 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 FNDC8Q8TC99 324 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 C10orf82Q8WW14 230 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 ASB10Q8WXI3 467 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 NSMAFQ92636 917 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 LHX4Q969G2 390 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 ERGIC1Q969X5 290 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 NABP1Q96AH0 204 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 MPP4Q96JB8 637 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 MEGF10Q96KG7 1140 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 ZNF583Q96ND8 569 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 ZNF582Q96NG8 517 aaPredicted RBP4.29□□□□□ -1.72
SPG11-208ENST00000558155 TBX15Q96SF7 602 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 SEPHS2Q99611 448 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 CDADC1Q9BWV3 514 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 CNTD2Q9H8S5 307 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 INIPQ9NRY2 104 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 TMEM100Q9NV29 134 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 AURKAIP1Q9NWT8 199 aaPredicted RBP4.29□□□□□ -1.72
SPG11-208ENST00000558155 STARD10Q9Y365 291 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 UGT2A1Q9Y4X1 527 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 NOTCH3Q9UM47 2321 aa4.29□□□□□ -1.72
SPG11-208ENST00000558155 PRKDCP78527 4128 aaKnown RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 A0A0U1RQK1 487 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 TRPC5OSA6NMA1 111 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 C22orf46C9J442 243 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 FAM229AH3BQW9 127 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 KPNA4O00629 521 aaPredicted RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 SLC2A10O95528 541 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 MPIG6BO95866 241 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 ECDO95905 644 aaPredicted RBP4.28□□□□□ -1.72
SPG11-208ENST00000558155 F13BP05160 661 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 FBP1P09467 338 aa4.28□□□□□ -1.72
SPG11-208ENST00000558155 MMP9P14780 707 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms