RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 GFI1Q99684 422 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 UTP23Q9BRU9 249 aaKnown RBP7.35□□□□□ -1.23
ATXN3-235ENST00000556082 EMC6Q9BV81 110 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 SLC22A4Q9H015 551 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 IRF2BPLQ9H1B7 796 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 C1orf198Q9H425 327 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 TCF7L1Q9HCS4 588 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 POLE4Q9NR33 117 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 DEPPQ9NTK1 212 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 ANKRD10Q9NXR5 420 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 ETAA1Q9NY74 926 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 GLTPQ9NZD2 209 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 LRFN1Q9P244 771 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 EXTL2Q9UBQ6 330 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 ING1Q9UK53 422 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-235ENST00000556082 FOXJ3Q9UPW0 622 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 CAMK2AQ9UQM7 478 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 RCE1Q9Y256 329 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 AK6Q9Y3D8 172 aaKnown RBP7.35□□□□□ -1.23
ATXN3-235ENST00000556082 LRP12Q9Y561 859 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 PCDHGA9Q9Y5G4 932 aaKnown RBP7.35□□□□□ -1.23
ATXN3-235ENST00000556082 ETV7Q9Y603 341 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 TTC28Q96AY4 2481 aa7.35□□□□□ -1.23
ATXN3-235ENST00000556082 A0A0G2JMM0 328 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 A0A1B0GTH9 108 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 A0A1W2PPB8 328 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 A0A1W2PPK0 400 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 A0A1W2PRS3 328 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 KIR3DP1A8MWS1 328 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 FAM25AB3EWG3 89 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 FAM25CB3EWG5 89 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 FAM25GB3EWG6 89 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 G3V3Y1 287 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 CTDSPLO15194 276 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 PLA2G10O15496 165 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 RAMP1O60894 148 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 SLC43A1O75387 559 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 UBL3O95164 117 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 OPN1LWP04000 364 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 EIF4EP06730 217 aaKnown RBP7.34□□□□□ -1.23
ATXN3-235ENST00000556082 QDPRP09417 244 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 H2BFMP0C1H6 154 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 CSRP1P21291 193 aaKnown RBP7.34□□□□□ -1.23
ATXN3-235ENST00000556082 ACHEP22303 614 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 MNDAP41218 407 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 RPS27P42677 84 aaKnown RBP7.34□□□□□ -1.23
ATXN3-235ENST00000556082 RFX2P48378 723 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 CSNK1A1P48729 337 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 MMP15P51511 669 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 GFRA1P56159 465 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 CARD18P57730 90 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 OC90Q02509 493 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-235ENST00000556082 TCF15Q12870 199 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 IKZF1Q13422 519 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 CAMK2DQ13557 499 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 IL18Q14116 193 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 P2RY14Q15391 338 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 UBE2NLQ5JXB2 153 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 TMEM244Q5VVB8 128 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 GPAT4Q86UL3 456 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 GGNQ86UU5 652 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-235ENST00000556082 C20orf196Q8IYI0 205 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 ELMOD2Q8IZ81 293 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 CADM3Q8N126 398 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 TMEM123Q8N131 208 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 ZIC4Q8N9L1 334 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 C19orf18Q8NEA5 215 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 OR4M1Q8NGD0 313 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 OR2V1Q8NHB1 315 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 OR14L1PQ8NHC6 308 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 C15orf40Q8WUR7 153 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 PNPLA2Q96AD5 504 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 SLAMF6Q96DU3 332 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 ZC3HAV1LQ96H79 300 aaKnown RBP7.34□□□□□ -1.23
ATXN3-235ENST00000556082 ADGRG7Q96K78 797 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 OR2M2Q96R28 347 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 NEURL2Q9BR09 285 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 WACQ9BTA9 647 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 ABCG5Q9H222 651 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 B3GAT2Q9NPZ5 323 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 G6PC2Q9NQR9 355 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 NPAP1Q9NZP6 1156 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 B4GALT7Q9UBV7 327 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 IL17BQ9UHF5 180 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 OR52A1Q9UKL2 312 aa7.34□□□□□ -1.23
ATXN3-235ENST00000556082 PCSK5Q92824 1860 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 A0A0G2JMP0 313 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 A0A0X1KG70 313 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 TMEM269A0A1B0GVZ9 245 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 NPIPA2E9PIF3 369 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 NPIPA3F8WFD2 350 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 SMAD9O15198 467 aaKnown RBP7.33□□□□□ -1.24
ATXN3-235ENST00000556082 SULT1B1O43704 296 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 GSTZ1O43708 216 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-235ENST00000556082 PAHP00439 452 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 CD2P06729 351 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 RFPL3SP0C7P2 107 aa7.33□□□□□ -1.24
ATXN3-235ENST00000556082 FTH1P19P0C7X4 201 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms