RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, human

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB3-208	ENST00000555576	SH3GL1	Q99961	368 aa		11.11	□□□□□ -0.63
TUBB3-208	ENST00000555576	OR5V1	Q9UGF6	321 aa		11.11	□□□□□ -0.63
TUBB3-208	ENST00000555576	PPP1R3C	Q9UQK1	317 aa		11.11	□□□□□ -0.63
TUBB3-208	ENST00000555576	LRCH1	Q9Y2L9	728 aa		11.11	□□□□□ -0.63
TUBB3-208	ENST00000555576	ADAM18	Q9Y3Q7	739 aa		11.11	□□□□□ -0.63
TUBB3-208	ENST00000555576	SNX13	Q9Y5W8	968 aa		11.11	□□□□□ -0.63
TUBB3-208	ENST00000555576		A0A1B0GWJ7	208 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	FAM220BP	B1ANY3	271 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576		J3KTA2	159 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	SGCE	O43556	437 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	CTLA4	P16410	223 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	SCRN3	Q0VDG4	424 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	ANKDD1A	Q495B1	522 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	ESCO2	Q56NI9	601 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	METTL21C	Q5VZV1	264 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	JAZF1	Q86VZ6	243 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	MUC20	Q8N307	709 aa	Predicted RBP	11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	DYDC1	Q8WWB3	177 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	SLC25A28	Q96A46	364 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	ECSIT	Q9BQ95	431 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	SIKE1	Q9BRV8	207 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	SLITRK2	Q9H156	845 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	PRDM13	Q9H4Q3	707 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	INTS9	Q9NV88	658 aa	Known RBP	11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	IL20RA	Q9UHF4	553 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	WNK1	Q9H4A3	2382 aa		11.1	□□□□□ -0.63
TUBB3-208	ENST00000555576	IGHV3OR16-10	A0A075B7F0	116 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	IGHV2-70D	A0A0C4DH43	119 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576		A0A0G2JND7	137 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	TEX13C	A0A0J9YWL9	993 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	MDFIC2	A0A1B0GVS7	189 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	POM121C	A8CG34	1229 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576		J3QW42	95 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	MLNR	O43193	412 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	FSTL3	O95633	263 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	IFNA14	P01570	189 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	RAC2	P15153	192 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	MDK	P21741	143 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	CPT2	P23786	658 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	SLC9A3	P48764	834 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	SELENOW	P63302	87 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	DEFA6	Q01524	100 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	GUCY1A3	Q02108	690 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	AQP6	Q13520	282 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	CCDC92	Q53HC0	331 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	OTP	Q5XKR4	325 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	FBXW12	Q6X9E4	464 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	VTCN1	Q7Z7D3	282 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	OAF	Q86UD1	273 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	KLB	Q86Z14	1044 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	POU5F2	Q8N7G0	328 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	OR10AD1	Q8NGE0	317 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	OR52E2	Q8NGJ4	325 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	MEGF10	Q96KG7	1140 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576		Q96M85	177 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	TMEM165	Q9HC07	324 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	RHCG	Q9UBD6	479 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576	MMP24	Q9Y5R2	645 aa		11.09	□□□□□ -0.63
TUBB3-208	ENST00000555576		A0A087WUU8	490 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	TRAV40	A0A0B4J280	105 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	PRSS37	A4D1T9	235 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	EFCAB9	A8MZ26	197 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	IMPA2	O14732	288 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	MRAS	O14807	208 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	SURF4	O15260	269 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	AHCYL1	O43865	530 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	ZNF205	O95201	554 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	NPPA	P01160	153 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	CD14	P08571	375 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	DBH	P09172	617 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	GUCA1A	P43080	201 aa	Predicted RBP	11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	YAP1	P46937	504 aa	Known RBP	11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	HLX	Q14774	488 aa	Predicted RBP	11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	OCLN	Q16625	522 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	ZNF181	Q2M3W8	571 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	ZNF404	Q494X3	552 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	LRRN1	Q6UXK5	716 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	OR5AS1	Q8N127	324 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	PCYOX1L	Q8NBM8	494 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	ACOT11	Q8WXI4	607 aa	Predicted RBP	11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	PTP4A1	Q93096	173 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	TPD52L3	Q96J77	140 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	COG8	Q96MW5	612 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	GMPR2	Q9P2T1	348 aa	Known RBP	11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	ASH2L	Q9UBL3	628 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	ATPIF1	Q9UII2	106 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	DOCK11	Q5JSL3	2073 aa		11.08	□□□□□ -0.64
TUBB3-208	ENST00000555576	BBIP1	A8MTZ0	92 aa		11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576		H0YL77	283 aa		11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	IFNL4	K9M1U5	179 aa		11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	RER1	O15258	196 aa		11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	CYB5R3	P00387	301 aa	Predicted RBP	11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	RPS2	P15880	293 aa	Known RBP	11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	PMEL	P40967	661 aa		11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	GPR4	P46093	362 aa		11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	MTNR1A	P48039	350 aa		11.07	□□□□□ -0.64
TUBB3-208	ENST00000555576	LSM6	P62312	80 aa	Known RBP	11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms