RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 DKKL1Q9UK85 242 aa7.98□□□□□ -1.13
TMEM116-209ENST00000550020 MGAT4AQ9UM21 535 aa7.98□□□□□ -1.13
TMEM116-209ENST00000550020 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
TMEM116-209ENST00000550020 NPTNQ9Y639 398 aa7.98□□□□□ -1.13
TMEM116-209ENST00000550020 CHCHD2Q9Y6H1 151 aaPredicted RBP7.98□□□□□ -1.13
TMEM116-209ENST00000550020 MYO9BQ13459 2157 aa7.98□□□□□ -1.13
TMEM116-209ENST00000550020 TMEM272A0A1B0GTI8 110 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 CIB4A0PJX0 185 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 DISC1C4P0D8 188 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 ZNF354AO60765 605 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 RGS11O94810 467 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 MPZL1O95297 269 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 IFNA7P01567 189 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 TPOP07202 933 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 CHRM2P08172 466 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 MELTFP08582 738 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 UBBP0CG47 229 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 COX6A1P12074 109 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 TBPP20226 339 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 IL11P20809 199 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 DNASE1P24855 282 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 VEGFCP49767 419 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 GNG2P59768 71 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 SIGLEC14Q08ET2 396 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 POU4F3Q15319 338 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 TMEM176BQ3YBM2 270 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 TRIM61Q5EBN2 209 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 DCAF12Q5T6F0 453 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 ZNF626Q68DY1 528 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 STEAP1BQ6NZ63 245 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 SLC25A47Q6Q0C1 308 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 DOK3Q7L591 496 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 ZNF627Q7L945 461 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 OR2W3Q7Z3T1 314 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 GPAT4Q86UL3 456 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 RPS19BP1Q86WX3 136 aaKnown RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 LINC00346Q8IVM7 164 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 C1orf210Q8IVY1 113 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 SLC7A5P1Q8MH63 180 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 ARMC10Q8N2F6 343 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 PIAS4Q8N2W9 510 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 C9orf62Q8N4C0 152 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 BMPERQ8N8U9 685 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 OR1M1Q8NGA1 313 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 MAFAQ8NHW3 353 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 GPX8Q8TED1 209 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 PAQR8Q8TEZ7 354 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 KCNE4Q8WWG9 221 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 ATOH1Q92858 354 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 SLC25A28Q96A46 364 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 TMEM41AQ96HV5 264 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 FOXN4Q96NZ1 517 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 PIGQQ9BRB3 760 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 FAM117AQ9C073 453 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 PBOV1Q9GZY1 135 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 METTL17Q9H7H0 456 aaPredicted RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 APMAPQ9HDC9 416 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 HPF1Q9NWY4 346 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 MRPL15Q9P015 296 aaKnown RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 B3GAT1Q9P2W7 334 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 FBLN5Q9UBX5 448 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 ZNF69Q9UC07 566 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 SLC5A6Q9Y289 635 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 MKI67P46013 3256 aaKnown RBP7.97□□□□□ -1.13
TMEM116-209ENST00000550020 ADAMTS20P59510 1910 aa7.97□□□□□ -1.13
TMEM116-209ENST00000550020 NPIPA2E9PIF3 369 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 NPIPA3F8WFD2 350 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 LINC01387J3KSC0 135 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 TNFRSF10AO00220 468 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 P2RY10O00398 339 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 TRAF3IP2O43734 574 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-209ENST00000550020 EFNA2O43921 213 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 GMDSO60547 372 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 ALX3O95076 343 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 WISP1O95388 367 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 RAB3DO95716 219 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 WNT11O96014 354 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 CYB5AP00167 134 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 TTRP02766 147 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 P04436 131 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 ALDOBP05062 364 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 QDPRP09417 244 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 LIFP15018 202 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 MSR1P21757 451 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 ACP1P24666 158 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 CSNK1A1P48729 337 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF84P51523 738 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 MLF1P58340 268 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 GMFBP60983 142 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 ARL6IP1Q15041 203 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 MPPED2Q15777 294 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 HIST3H3Q16695 136 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 LINC00303Q3SY05 128 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 RAET1LQ5VY80 246 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 MTFR2Q6P444 385 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 NHLRC1Q6VVB1 395 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 LSRQ86X29 649 aaPredicted RBP7.96□□□□□ -1.14
TMEM116-209ENST00000550020 ZNF584Q8IVC4 421 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 WDSUB1Q8N9V3 476 aa7.96□□□□□ -1.14
TMEM116-209ENST00000550020 PLPP7Q8NBV4 271 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms