RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 FAM206AQ9NX38 181 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 CYB5R1Q9UHQ9 305 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 U3KQ87 197 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 RALGAPA1Q6GYQ0 2036 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 CCDC163A0A0D9SF12 145 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 GDF9O60383 454 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 AKAIN1P0CW23 69 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 HOXA6P31267 233 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 GPR85P60893 370 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 UEVLDQ8IX04 471 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 ADPRHL1Q8NDY3 354 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 GPX8Q8TED1 209 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 GINS4Q9BRT9 223 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 CHIAQ9BZP6 476 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 CA10Q9NS85 328 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 EIF3KQ9UBQ5 218 aaKnown RBP16.06■□□□□ 0.16
VIM-209ENST00000544301 PISDQ9UG56 409 aa16.06■□□□□ 0.16
VIM-209ENST00000544301 TNRC6BQ9UPQ9 1833 aaKnown RBP16.05■□□□□ 0.16
VIM-209ENST00000544301 LDLRAD4O15165 306 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 VSIG10L2P0DP72 767 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 FGF5P12034 268 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 GABRA1P14867 456 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 LAP3P28838 519 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 EIF1AXP47813 144 aaKnown RBP16.05■□□□□ 0.16
VIM-209ENST00000544301 SSBP1Q04837 148 aaKnown RBP16.05■□□□□ 0.16
VIM-209ENST00000544301 C1orf100Q5SVJ3 147 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 THEM4Q5T1C6 240 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 SLC36A1Q7Z2H8 476 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 ADGRE4PQ86SQ3 457 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 LYPD6Q86Y78 171 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 JAGN1Q8N5M9 183 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 IFI44Q8TCB0 444 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 ELP5Q8TE02 316 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 SORCS2Q96PQ0 1159 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 GAREM1Q9H706 876 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 PIPOXQ9P0Z9 390 aa16.05■□□□□ 0.16
VIM-209ENST00000544301 A0A1W2PNR3 127 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 LOC390937A0A1W2PQ73 354 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 TOXO94900 526 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 CD3DP04234 171 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 CYC1P08574 325 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 ACSM4P0C7M7 580 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 UBALD2Q8IYN6 164 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 WDSUB1Q8N9V3 476 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 CLEC1AQ8NC01 280 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 OR10S1Q8NGN2 331 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 OR5B2Q96R09 309 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 FCER2P06734 321 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 PGA4P0DJD7 388 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 PGA3P0DJD8 388 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 ZNF81P51508 661 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 CLRN1P58418 232 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 PCOLCEQ15113 449 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 ZNF627Q7L945 461 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 FADS6Q8N9I5 356 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 ZNF680Q8NEM1 530 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 NOXO1Q8NFA2 376 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 OR51S1Q8NGJ8 323 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 OR52B4Q8NGK2 314 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 OR6N1Q8NGY5 312 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 FGGYQ96C11 551 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 SEH1LQ96EE3 360 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 RADILQ96JH8 1075 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 GAL3ST1Q99999 423 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 IER2Q9BTL4 223 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 IRF2BPLQ9H1B7 796 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 C1orf198Q9H425 327 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 RHBDD3Q9Y3P4 386 aa16.04■□□□□ 0.16
VIM-209ENST00000544301 A0A1W2PPL8 197 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 ZNF814B7Z6K7 855 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 SULT1C2O00338 296 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 TRAF3IP2O43734 574 aaPredicted RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 TTRP02766 147 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 ZNF28P17035 718 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 SSTR2P30874 369 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 PSMA6P60900 246 aaKnown RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 KLHL24Q6TFL4 600 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 NKAIN3Q8N8D7 197 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 OR2I1PQ8NGU4 316 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 OR8S1Q8NH09 359 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 DVL3Q92997 716 aaPredicted RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 CDX2Q99626 313 aaPredicted RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 WDR54Q9H977 334 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 MYEF2Q9P2K5 600 aaKnown RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 CHCHD2Q9Y6H1 151 aaPredicted RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 IGHG1P01857 330 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 CFIP05156 583 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 LPLP06858 475 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 GIPP09681 153 aaPredicted RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 ACTBP60709 375 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 ACTG1P63261 375 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 IL11RAQ14626 422 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 THOC7Q6I9Y2 204 aaKnown RBP16.03■□□□□ 0.16
VIM-209ENST00000544301 OR10K2Q6IF99 312 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 STEAP1BQ6NZ63 245 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 GPAT4Q86UL3 456 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 WDR5BQ86VZ2 330 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 ELMOD2Q8IZ81 293 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 OR4K17Q8NGC6 315 aa16.03■□□□□ 0.16
VIM-209ENST00000544301 OR4D6Q8NGJ1 314 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms