RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 V9GY05 133 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 ZFHX2Q9C0A1 2572 aaPredicted RBP19.85■□□□□ 0.77
HOMER3-204ENST00000539827 RER1O15258 196 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 MAS1P04201 325 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 CSF3P09919 207 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF133P52736 654 aaPredicted RBP19.84■□□□□ 0.77
HOMER3-204ENST00000539827 CLDN18P56856 261 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 CAMK2BQ13554 666 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 PLXDC2Q6UX71 529 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 LRRC28Q86X40 367 aaPredicted RBP19.84■□□□□ 0.77
HOMER3-204ENST00000539827 INTS12Q96CB8 462 aaKnown RBP19.84■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF416Q9BWM5 594 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 DHDHQ9UQ10 334 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 CSAG2Q9Y5P2 127 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 LINC00854A0A1B0GVQ3 168 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 SPNP16150 400 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 GUCA1AP43080 201 aaPredicted RBP19.84■□□□□ 0.77
HOMER3-204ENST00000539827 CLN3Q13286 438 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 TAB1Q15750 504 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 AAED1Q7RTV5 226 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 DNAAF1Q8NEP3 725 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 FDCSPQ8NFU4 85 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF671Q8TAW3 534 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF837Q96EG3 531 aaPredicted RBP19.84■□□□□ 0.77
HOMER3-204ENST00000539827 CYSLTR2Q9NS75 346 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 TBC1D24Q9ULP9 559 aa19.84■□□□□ 0.77
HOMER3-204ENST00000539827 A0A1W2PQ09 198 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 CYTIPO60759 359 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 SLC43A1O75387 559 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 RAF1P04049 648 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 NPR2P20594 1047 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 MSR1P21757 451 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 DEFA1P59665 94 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 DEFA3P59666 94 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 TAF13Q15543 124 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 BCL2L15Q5TBC7 163 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 ABHD3Q8WU67 409 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 SCMH1Q96GD3 660 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 FAM206AQ9NX38 181 aa19.83■□□□□ 0.77
HOMER3-204ENST00000539827 IFITM5A6NNB3 132 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 ZNF878C9JN71 531 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 P2RY10O00398 339 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 CDK2AP1O14519 115 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 DEFB109BQ30KR1 87 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 FOXL2NBQ6ZUU3 175 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.83■□□□□ 0.76
HOMER3-204ENST00000539827 LGALS14Q8TCE9 139 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 NABP1Q96AH0 204 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 DEFB127Q9H1M4 99 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 LIPGQ9Y5X9 500 aa19.83■□□□□ 0.76
HOMER3-204ENST00000539827 RIF1Q5UIP0 2472 aaKnown RBP19.82■□□□□ 0.76
HOMER3-204ENST00000539827 LOC107986453A0A1B0GWG9 222 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 ZNF708P17019 499 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 HSD11B1P28845 292 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 ZNF84P51523 738 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 PRKXP51817 358 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 CLDN12P56749 244 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 ENDOGQ14249 297 aaKnown RBP19.82■□□□□ 0.76
HOMER3-204ENST00000539827 RTP5Q14D33 572 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 HYAL4Q2M3T9 481 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 LRRC18Q8N456 261 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 ZFP62Q8NB50 900 aaPredicted RBP19.82■□□□□ 0.76
HOMER3-204ENST00000539827 ASB5Q8WWX0 329 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 NELFAQ9H3P2 528 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 PNRC2Q9NPJ4 139 aaKnown RBP19.82■□□□□ 0.76
HOMER3-204ENST00000539827 RCE1Q9Y256 329 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 N6AMT1Q9Y5N5 214 aa19.82■□□□□ 0.76
HOMER3-204ENST00000539827 ZNF292O60281 2723 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 A0A0G2JMP0 313 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 A0A0X1KG70 313 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 PROB1E7EW31 1015 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 AIPO00170 330 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 MMP16P51512 607 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 LSM6P62312 80 aaKnown RBP19.81■□□□□ 0.76
HOMER3-204ENST00000539827 CDC20Q12834 499 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 SLC10A1Q14973 349 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 ZNF704Q6ZNC4 412 aaPredicted RBP19.81■□□□□ 0.76
HOMER3-204ENST00000539827 GDPD3Q7L5L3 318 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 MEIOBQ8N635 442 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 OR4M2Q8NGB6 313 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 PBOV1Q9GZY1 135 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 SP140LQ9H930 580 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 HHLA2Q9UM44 414 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 ANXA2P2A6NMY6 339 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 SSX4O60224 188 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 ANXA2P07355 339 aaKnown RBP19.81■□□□□ 0.76
HOMER3-204ENST00000539827 ACHEP22303 614 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 PTBP1P26599 531 aaKnown RBP eCLIP19.81■□□□□ 0.76
HOMER3-204ENST00000539827 TALDO1P37837 337 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 C3AR1Q16581 482 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 Q8N402 240 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 TMEM178AQ8NBL3 297 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 OR13C3Q8NGS6 347 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 SPATA2Q9UM82 520 aa19.81■□□□□ 0.76
HOMER3-204ENST00000539827 LMX1BO60663 402 aa19.8■□□□□ 0.76
HOMER3-204ENST00000539827 DCTDP32321 178 aa19.8■□□□□ 0.76
HOMER3-204ENST00000539827 TNFSF10P50591 281 aa19.8■□□□□ 0.76
HOMER3-204ENST00000539827 RNFT1Q5M7Z0 435 aa19.8■□□□□ 0.76
HOMER3-204ENST00000539827 ASPHD2Q6ICH7 369 aa19.8■□□□□ 0.76
HOMER3-204ENST00000539827 THRSPQ92748 146 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms