RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LIPNQ5VXI9 398 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 GPR139Q6DWJ6 353 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 DCDC5Q6ZRR9 648 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 CALHM3Q86XJ0 350 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ANGPTL5Q86XS5 388 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ARHGEF39Q8N4T4 335 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 TMEM185AQ8NFB2 350 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 GJC3Q8NFK1 279 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 STEAP2Q8NFT2 490 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 MIPOL1Q8TD10 442 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 WNT2BQ93097 391 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ZNF582Q96NG8 517 aaPredicted RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 CACNG6Q9BXT2 260 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 PRORYQ9H606 182 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 METTL17Q9H7H0 456 aaPredicted RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 GPR35Q9HC97 309 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ACOXLQ9NUZ1 547 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 AK6Q9Y3D8 172 aaKnown RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 OR7C1O76099 320 aaPredicted RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 THY1P04216 161 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 CD79BP40259 229 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 CX3CR1P49238 355 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 INAQ16352 499 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 HAGHLQ6PII5 290 aaPredicted RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 DPY19L2P2Q6ZN68 376 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 SLC22A24Q8N4F4 322 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 KLHL36Q8N4N3 616 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 SCCPDHQ8NBX0 429 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 DNAAF1Q8NEP3 725 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ZNF420Q8TAQ5 688 aaPredicted RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 AKAP1Q92667 903 aaKnown RBP eCLIP6.36□□□□□ -1.39
MSH6-209ENST00000538136 FGGYQ96C11 551 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ELMOD3Q96FG2 381 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 BORCS8Q96FH0 119 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 SNX18Q96RF0 628 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 TEAD3Q99594 435 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 PSD2Q9BQI7 771 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 PROK2Q9HC23 129 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 PAIP2BQ9ULR5 123 aaKnown RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 TIMM10BQ9Y5J6 103 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 TCRBV3S1A0A5B6 114 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 BHLHE40O14503 412 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 RBMXL2O75526 392 aaKnown RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 ZNF16P17020 682 aaPredicted RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 NFYBP25208 207 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ZNF91Q05481 1191 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 E2F2Q14209 437 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 IDNKQ5T6J7 187 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 OR10K2Q6IF99 312 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 CEACAM19Q7Z692 300 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 KBTBD8Q8NFY9 601 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ABHD5Q8WTS1 349 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ARHGDIGQ99819 225 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ATF6BQ99941 703 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 YIPF3Q9GZM5 350 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 FAM234AQ9H0X4 552 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 TAS2R5Q9NYW4 299 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ZNF229Q9UJW7 825 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 FBXO9Q9UK97 447 aaPredicted RBP6.36□□□□□ -1.39
MSH6-209ENST00000538136 SLC7A11Q9UPY5 501 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 MEIS3P1A6NDR6 274 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 AQP7P3A6NL99 342 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF708P17019 499 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 SERPINA2P20848 420 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 TNFSF4P23510 183 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 FPR3P25089 353 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PTAFRP25105 342 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PCSK6P29122 969 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PTGDSP41222 190 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 FRKP42685 505 aaPredicted RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 TGM4P49221 684 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 CRYBA2P53672 197 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 HOXA4Q00056 320 aaPredicted RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 COX10Q12887 443 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZSWIM7Q19AV6 140 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 MESTQ5EB52 335 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ARMCX4Q5H9R4 360 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 LYPD8Q6UX82 237 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 STAC2Q6ZMT1 411 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 RASSF6Q6ZTQ3 369 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 GPALPP1Q8IXQ4 340 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 DND1Q8IYX4 353 aaKnown RBP6.35□□□□□ -1.39
MSH6-209ENST00000538136 NOXO1Q8NFA2 376 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 STK35Q8TDR2 534 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 RDH5Q92781 318 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 CMBLQ96DG6 245 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 FCRL1Q96LA6 429 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ABHD6Q9BV23 337 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 GPR84Q9NQS5 396 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 DHDHQ9UQ10 334 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 MEMO1Q9Y316 297 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 CMAHPQ9Y471 501 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 IGKV1D-42A0A075B6H8 117 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 A0A1W2PQ09 198 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 SLC22A23A1A5C7 686 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 ZNF850A8MQ14 1090 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 E9PLN8 166 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 HS3ST1O14792 307 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 PEX14O75381 377 aa6.35□□□□□ -1.39
MSH6-209ENST00000538136 OR4A8P0C604 315 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms