RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 RELL2Q8NC24 303 aaPredicted RBP11.53□□□□□ -0.56
TRIM25-202ENST00000537230 TSEN15Q8WW01 171 aaKnown RBP11.53□□□□□ -0.56
TRIM25-202ENST00000537230 ABHD6Q9BV23 337 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 CHST6Q9GZX3 395 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 SLITRK2Q9H156 845 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 TMEM138Q9NPI0 162 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 MED9Q9NWA0 146 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 MED29Q9NX70 200 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 VSX1Q9NZR4 365 aaPredicted RBP11.53□□□□□ -0.56
TRIM25-202ENST00000537230 TMEM14AQ9Y6G1 99 aa11.53□□□□□ -0.56
TRIM25-202ENST00000537230 LY6G6EA0A0G2JKS1 128 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 TMEM272A0A1B0GTI8 110 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 RBBP9O75884 186 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 KDM4BO94953 1096 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 AHSA1O95433 338 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 FOXK1P85037 733 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 GK2Q14410 553 aaPredicted RBP11.52□□□□□ -0.57
TRIM25-202ENST00000537230 RBMS2Q15434 407 aaKnown RBP11.52□□□□□ -0.57
TRIM25-202ENST00000537230 OR7A5Q15622 319 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 ZNF660Q6AZW8 331 aaPredicted RBP11.52□□□□□ -0.57
TRIM25-202ENST00000537230 ZNF679Q8IYX0 411 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 PLPP7Q8NBV4 271 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 OR2AK2Q8NG84 335 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 TNFAIP8L1Q8WVP5 186 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 APMAPQ9HDC9 416 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 WNT16Q9UBV4 365 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 U3KQA8 63 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 OR6C76A6NM76 312 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 HMSDA8MTL9 139 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 F5H5P2 479 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 H3BML4 177 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 CXCL12P48061 93 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 B3GNTL1Q67FW5 361 aaPredicted RBP11.52□□□□□ -0.57
TRIM25-202ENST00000537230 C11orf88Q6PI97 169 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 LINC00346Q8IVM7 164 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 OR51S1Q8NGJ8 323 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 STK35Q8TDR2 534 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 DVL3Q92997 716 aaPredicted RBP11.52□□□□□ -0.57
TRIM25-202ENST00000537230 WDR77Q9BQA1 342 aaPredicted RBP11.52□□□□□ -0.57
TRIM25-202ENST00000537230 LDAHQ9H6V9 325 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 LRP12Q9Y561 859 aa11.52□□□□□ -0.57
TRIM25-202ENST00000537230 LOC101059948A0A1B0GTJ6 334 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 H7C417 338 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 EFNA2O43921 213 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 APOC3P02656 99 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 RLN2P04090 185 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 HEXBP07686 556 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 SORDQ00796 357 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 EIF2B1Q14232 305 aaKnown RBP11.51□□□□□ -0.57
TRIM25-202ENST00000537230 TMEM71Q6P5X7 295 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 OR8S1Q8NH09 359 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 MTFP1Q9UDX5 166 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 TRBV11-1A0A0K0K1C0 115 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 RASGEF1BQ0VAM2 473 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 TEX30Q5JUR7 227 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 SLC18B1Q6NT16 456 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 PAPD4Q6PIY7 484 aaKnown RBP11.51□□□□□ -0.57
TRIM25-202ENST00000537230 CORO6Q6QEF8 472 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 C17orf107Q6ZR85 190 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 NDUFAF7Q7L592 441 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 KMT5CQ86Y97 462 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 PDZD9Q8IXQ8 264 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 RNF128Q8TEB7 428 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 TGIF2Q9GZN2 237 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 SCPEP1Q9HB40 452 aa11.51□□□□□ -0.57
TRIM25-202ENST00000537230 IGLV3-12A0A075B6K2 115 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 ARPC4-TTLL3A0A0A6YYG9 625 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 LMX1BO60663 402 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 SCRG1O75711 98 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 LDOC1O95751 146 aaPredicted RBP11.5□□□□□ -0.57
TRIM25-202ENST00000537230 CALCRP30988 508 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 ARRB1P49407 418 aaPredicted RBP11.5□□□□□ -0.57
TRIM25-202ENST00000537230 ARHGDIBP52566 201 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 SLC26A5P58743 744 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 CCL7P80098 99 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 FOXF1Q12946 379 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 LRFN4Q6PJG9 635 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 KRT77Q7Z794 578 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 OR5M9Q8NGP3 310 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 HLA-CQ95604 372 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 GAL3ST1Q99999 423 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 EMC6Q9BV81 110 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 STEAP1Q9UHE8 339 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 A0A1B0GTQ1 180 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 SMAD9O15198 467 aaKnown RBP11.5□□□□□ -0.57
TRIM25-202ENST00000537230 XRCC3O43542 346 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 GTF2F2P13984 249 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 FAUP35544 74 aaKnown RBP11.5□□□□□ -0.57
TRIM25-202ENST00000537230 POU3F4P49335 361 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 POU3F1Q03052 451 aaPredicted RBP11.5□□□□□ -0.57
TRIM25-202ENST00000537230 C4orf46Q504U0 113 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 FAM74A1Q5RGS3 127 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 DNM1P46Q6ZS02 220 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 NAXDQ8IW45 347 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 OR51A2Q8NGJ7 313 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 OR2I1PQ8NGU4 316 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 SHDQ96IW2 340 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 MNTQ99583 582 aa11.5□□□□□ -0.57
TRIM25-202ENST00000537230 MFFQ9GZY8 342 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms