RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 SF3A3Q12874 501 aaKnown RBP eCLIP12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 PSG7Q13046 419 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 CDK5R2Q13319 367 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 IFI44LQ53G44 452 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 CGB2Q6NT52 195 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 SPICQ8N5J4 248 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 COG8Q96MW5 612 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 ZNF570Q96NI8 536 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 TMEM106BQ9NUM4 274 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 CMTM6Q9NX76 183 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 OPN4Q9UHM6 478 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 PURGQ9UJV8 347 aaKnown RBP12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 TMEM5Q9Y2B1 443 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 ADAM18Q9Y3Q7 739 aa12.84□□□□□ -0.35
DEPDC7-204ENST00000532078 A0A087WUU8 490 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 CXCR6O00574 342 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 CDC42EP2O14613 210 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 GSTA4O15217 222 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 SURF4O15260 269 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 KITLGP21583 273 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 FPR2P25090 351 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 LIPEQ05469 1076 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 AQP6Q13520 282 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 ZBED5Q49AG3 693 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 MESTQ5EB52 335 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 TMPRSS11FQ6ZWK6 438 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 FKBP9P1Q75LS8 142 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 RRM2BQ7LG56 351 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 CYP4Z1Q86W10 505 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 KLHL36Q8N4N3 616 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 POU5F2Q8N7G0 328 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 OR2Z1Q8NG97 314 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 SAMD8Q96LT4 415 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 Q96M85 177 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 ANKRD19PQ9H560 264 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 ARMCX1Q9P291 453 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 MGAM2Q2M2H8 2515 aa12.83□□□□□ -0.36
DEPDC7-204ENST00000532078 DYSFO75923 2080 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 MEGF8Q7Z7M0 2845 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 TEX13CA0A0J9YWL9 993 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 PRSS37A4D1T9 235 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 J3QW42 95 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 SCG5P05408 212 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 SBK2P0C263 348 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 KRR1Q13601 381 aaKnown RBP12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 TMEM155Q4W5P6 130 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 SPRNQ5BIV9 151 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 ARMCX4Q5H9R4 360 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 CBLL1Q75N03 491 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 SLC15A3Q8IY34 581 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 ZNF283Q8N7M2 679 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 RP9Q8TA86 221 aaKnown RBP12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 POP5Q969H6 163 aaKnown RBP12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 DCLRE1CQ96SD1 692 aaKnown RBP12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 POFUT1Q9H488 388 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 NTN4Q9HB63 628 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 DCAF16Q9NXF7 216 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
DEPDC7-204ENST00000532078 SPRY1O43609 319 aaPredicted RBP12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 SERPINA1P01009 418 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 CTLA4P16410 223 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 SLC7A2P52569 658 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 BTG1P62324 171 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 GUCY1A3Q02108 690 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 GPR139Q6DWJ6 353 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 TBPL2Q6SJ96 375 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 RBMS3Q6XE24 437 aaKnown RBP12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 Q6ZR03 302 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 GLB1L2Q8IW92 636 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 DEFB108BQ8NET1 73 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 SGMS2Q8NHU3 365 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 CMBLQ96DG6 245 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 NMNAT1Q9HAN9 279 aaPredicted RBP12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 PATZ1Q9HBE1 687 aaKnown RBP12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 ESM1Q9NQ30 184 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 ASH2LQ9UBL3 628 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 IL19Q9UHD0 177 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 ATPIF1Q9UII2 106 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 PPP1R3CQ9UQK1 317 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 POLR3KQ9Y2Y1 108 aaPredicted RBP12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 STARD10Q9Y365 291 aa12.81□□□□□ -0.36
DEPDC7-204ENST00000532078 OR6C6A6NF89 314 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 IFNL4K9M1U5 179 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 NME4O00746 187 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 NDUFAB1O14561 156 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 SLC16A7O60669 478 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 KHDRBS3O75525 346 aaKnown RBP12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 NDUFB2O95178 105 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 COX4I1P13073 169 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 RAC2P15153 192 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 ZNF26P17031 533 aaPredicted RBP12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 SDHAP31040 664 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 RGS6P49758 472 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 LSM6P62312 80 aaKnown RBP12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 ZMYND11Q15326 602 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 C1orf94Q6P1W5 598 aa12.8□□□□□ -0.36
DEPDC7-204ENST00000532078 ADCK1Q86TW2 530 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms