RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 C9orf85Q96MD7 179 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 Q96MT0 163 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF145Q96MT1 663 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 WFIKKN1Q96NZ8 548 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OXGR1Q96P68 337 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MS4A4EQ96PG1 132 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR8B4Q96RC9 309 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 F2RL3Q96RI0 385 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYP2S1Q96SQ9 504 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 STACQ99469 402 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 VAT1Q99536 393 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TSNAXQ99598 290 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBBP8Q99708 897 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EBNA1BP2Q99848 306 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FOXC2Q99958 501 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SH3GL3Q99963 347 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 APOL4Q9BPW4 351 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SYT15Q9BQS2 421 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OVOL2Q9BRP0 275 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RHNO1Q9BSD3 238 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 AGMATQ9BSE5 352 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CCDC28BQ9BUN5 200 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM59Q9BXS4 323 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 BEX2Q9BXY8 128 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PARD6GQ9BYG4 376 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPS26Q9BYN8 205 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TSGA10Q9BZW7 698 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SELENOIQ9C0D9 397 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 C6orf62Q9GZU0 229 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 NXF2Q9GZY0 626 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 HOXD1Q9GZZ0 328 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ING2Q9H160 280 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR51B6Q9H340 312 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 DSN1Q9H410 356 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RBKSQ9H477 322 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 DHX35Q9H5Z1 703 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRORYQ9H606 182 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMEM38AQ9H6F2 299 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GAREM1Q9H706 876 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CWH43Q9H720 699 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 UBE2ZQ9H832 354 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 REEP1Q9H902 201 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SP140LQ9H930 580 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EBF2Q9HAK2 575 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SIAEQ9HAT2 523 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLEKHA3Q9HB20 300 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLEKHA1Q9HB21 404 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FOLH1BQ9HBA9 442 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EML4Q9HC35 981 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RETNQ9HD89 108 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZDHHC4Q9NPG8 344 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ESM1Q9NQ30 184 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRPL40Q9NQ50 206 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MEPEQ9NQ76 525 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 C8orf4Q9NR00 106 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SIRT7Q9NRC8 400 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FBXO6Q9NRD1 293 aaPredicted RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CTPS2Q9NRF8 586 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 DDX19AQ9NUU7 478 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 INTS9Q9NV88 658 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EXD2Q9NVH0 621 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FGFR1OP2Q9NVK5 253 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PLEKHJ1Q9NW61 149 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RMND1Q9NWS8 449 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 SDHAF2Q9NX18 166 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RHBDL2Q9NX52 303 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GIN1Q9NXP7 522 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 NDE1Q9NXR1 346 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 BABAM2Q9NXR7 383 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 VNN3Q9NY84 501 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TAS2R7Q9NYW3 318 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 NUDT4Q9NZJ9 180 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 THYN1Q9P016 225 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 IL17CQ9P0M4 197 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TAAR2Q9P1P5 351 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 UVRAGQ9P2Y5 699 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 EIF3KQ9UBQ5 218 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PRODH2Q9UF12 536 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 WARS2Q9UGM6 360 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CYB5R1Q9UHQ9 305 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RIMS3Q9UJD0 308 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 STOML2Q9UJZ1 356 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RALYQ9UKM9 306 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 FBXL3Q9UKT7 428 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 RARRES3Q9UL19 164 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 KCNS2Q9ULS6 477 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MGAT4AQ9UM21 535 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GUCA1BQ9UMX6 200 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TFR2Q9UP52 801 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 PPP2R2CQ9Y2T4 447 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ARL2BPQ9Y2Y0 163 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACOT9Q9Y305 439 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 GOLT1BQ9Y3E0 138 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF337Q9Y3M9 751 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 TBL2Q9Y4P3 447 aaKnown RBP0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRRC42Q9Y546 428 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 WIF1Q9Y5W5 379 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 CPQQ9Y646 472 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 MTCH2Q9Y6C9 303 aa0.48□□□□□ -2.33
RNU4-54P-201ENST00000516428 STYXL1Q9Y6J8 313 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms