RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 MRGBPQ9NV56 204 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 SLC25A37Q9NYZ2 338 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 VAPAQ9P0L0 249 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 DNAH9Q9NYC9 4486 aa9.61□□□□□ -0.87
RNF4-216ENST00000511859 ZNF879B4DU55 563 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 TOX4O94842 621 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 CFHR2P36980 270 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 NPY4RP50391 375 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 MMP16P51512 607 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 ZNF133P52736 654 aaPredicted RBP9.6□□□□□ -0.87
RNF4-216ENST00000511859 PCBP3P57721 371 aaKnown RBP9.6□□□□□ -0.87
RNF4-216ENST00000511859 MELKQ14680 651 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 TAF11Q15544 211 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 ZNF404Q494X3 552 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 C10orf128Q5T292 105 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 CD276Q5ZPR3 534 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 DLEU7Q6UYE1 221 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 Q6ZR03 302 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 TRPM8Q7Z2W7 1104 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 AKR7LQ8NHP1 331 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 BBS10Q8TAM1 723 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 TSPEARQ8WU66 669 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 CMTM5Q96DZ9 223 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 ZNF347Q96SE7 839 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 SPATA5L1Q9BVQ7 753 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 MRPL13Q9BYD1 178 aaKnown RBP9.6□□□□□ -0.87
RNF4-216ENST00000511859 FBLN5Q9UBX5 448 aa9.6□□□□□ -0.87
RNF4-216ENST00000511859 IGHV1-69DA0A0B4J2H0 117 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 LRRC30A6NM36 301 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 BBIP1A8MTZ0 92 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 CLIC1O00299 241 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 ZNF205O95201 554 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 IGHV1-69P01742 117 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 HIST1H2ABP04908 130 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 SFTPBP07988 381 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 MMP9P14780 707 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 HOXB9P17482 250 aaPredicted RBP9.59□□□□□ -0.87
RNF4-216ENST00000511859 NUDT2P50583 147 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 MTPNP58546 118 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 MXRA7P84157 204 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 SELPLGQ14242 412 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 ZNF181Q2M3W8 571 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 LRIF1Q5T3J3 769 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 FAM27BQ5VT28 67 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 C11orf88Q6PI97 169 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 DHRS4L2Q6PKH6 230 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 LINC00114Q6XXX2 140 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 HIST3H2AQ7L7L0 130 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 HDDC2Q7Z4H3 204 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 C1orf87Q8N0U7 546 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 DPP10Q8N608 796 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 PCYOX1LQ8NBM8 494 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 HIST1H2ACQ93077 130 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 WDFY2Q96P53 400 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 TBX15Q96SF7 602 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 SEPHS2Q99611 448 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 CGREF1Q99674 301 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 IKZF5Q9H5V7 419 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 EVA1AQ9H8M9 152 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 NANSQ9NR45 359 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 TBCCD1Q9NVR7 557 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 TAGLN3Q9UI15 199 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 TIMM10BQ9Y5J6 103 aa9.59□□□□□ -0.87
RNF4-216ENST00000511859 TRBV5-3A0A0A0MS03 114 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 BTBD17A6NE02 478 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 C5orf58C9J3I9 102 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 CH25HO95992 272 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 PRDX6P30041 224 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 CDAP32320 146 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 CDH12P55289 794 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 PCBD1P61457 104 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 RGNQ15493 299 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 SGCAQ16586 387 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 ZNF74Q16587 644 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 RUNDC3AQ59EK9 446 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 RABL3Q5HYI8 236 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 METTL11BQ5VVY1 283 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 SLC35E4Q6ICL7 350 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 ZNF841Q6ZN19 808 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 DCDC5Q6ZRR9 648 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 C10orf111Q8N326 155 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 PNLDC1Q8NA58 520 aaKnown RBP9.58□□□□□ -0.88
RNF4-216ENST00000511859 ATG16L2Q8NAA4 619 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 SCCPDHQ8NBX0 429 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 NOXO1Q8NFA2 376 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 ZNF420Q8TAQ5 688 aaPredicted RBP9.58□□□□□ -0.88
RNF4-216ENST00000511859 HAVCR1Q96D42 359 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 CMBLQ96DG6 245 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 NSL1Q96IY1 281 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 COG8Q96MW5 612 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 CPPED1Q9BRF8 314 aaPredicted RBP9.58□□□□□ -0.88
RNF4-216ENST00000511859 CDADC1Q9BWV3 514 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 OR2H1Q9GZK4 316 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 EFCAB1Q9HAE3 211 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 SMURF2Q9HAU4 748 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 GID8Q9NWU2 228 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 STX18Q9P2W9 335 aaKnown RBP9.58□□□□□ -0.88
RNF4-216ENST00000511859 ZNF229Q9UJW7 825 aa9.58□□□□□ -0.88
RNF4-216ENST00000511859 VPREB3Q9UKI3 123 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms