RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PTNP21246 168 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ATP6V1B2P21281 511 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 PSMA4P25789 261 aaKnown RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 AGTR1P30556 359 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ATP12AP54707 1039 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 PSMD4P55036 377 aaKnown RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 SELENOWP63302 87 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 HPCAP84074 193 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 FLOT2Q14254 428 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 MED22Q15528 200 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 TAB1Q15750 504 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 DUSP7Q16829 419 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ZNF672Q499Z4 452 aaPredicted RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 LRRC23Q53EV4 343 aaPredicted RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 ZNF311Q5JNZ3 666 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 PDZK1Q5T2W1 519 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 AP1ARQ63HQ0 302 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 FRRS1Q6ZNA5 592 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 CCDC80Q76M96 950 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 NUFIP2Q7Z417 695 aaKnown RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 TUSC5Q8IXB3 177 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 PEX5LQ8IYB4 626 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 GABRG1Q8N1C3 465 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ZNF619Q8N2I2 560 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ZNF614Q8N883 585 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 STEAP2Q8NFT2 490 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 KBTBD8Q8NFY9 601 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 OR2V1Q8NHB1 315 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 BBS10Q8TAM1 723 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 HDAC2Q92769 488 aaKnown RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 OSTF1Q92882 214 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 TAMM41Q96BW9 452 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ASB9Q96DX5 294 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 PYURFQ96I23 114 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 SEPHS2Q99611 448 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 KLHDC3Q9BQ90 382 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 TRAF4Q9BUZ4 470 aaPredicted RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 RSPO3Q9BXY4 272 aaPredicted RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 TBL1XR1Q9BZK7 514 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 HOXD1Q9GZZ0 328 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 DENND2DQ9H6A0 471 aaPredicted RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 TMEM185BQ9H7F4 350 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 GORASP2Q9H8Y8 452 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 CACYBPQ9HB71 228 aaKnown RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 FANCFQ9NPI8 374 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 UBQLN4Q9NRR5 601 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 DCAF13Q9NV06 445 aaKnown RBP5.57□□□□□ -1.52
VIM-207ENST00000495528 ADPRHL2Q9NX46 363 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ZNF69Q9UC07 566 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 IFT52Q9Y366 437 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 V9GYQ6 96 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 ALPK2Q86TB3 2170 aa5.57□□□□□ -1.52
VIM-207ENST00000495528 A0A096LNT2 108 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 CLDN24A6NM45 220 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 H0YHG0 523 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 WNT9BO14905 357 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 EFNA2O43921 213 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 SSX4O60224 188 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 RAMP1O60894 148 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 ENTPD5O75356 428 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 UGT2B17O75795 530 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 OXSR1O95747 527 aaPredicted RBP5.56□□□□□ -1.52
VIM-207ENST00000495528 DBIP07108 87 aaKnown RBP5.56□□□□□ -1.52
VIM-207ENST00000495528 HOXB5P09067 269 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 PABPC4LP0CB38 370 aaKnown RBP5.56□□□□□ -1.52
VIM-207ENST00000495528 FAM157CP0CG43 387 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 ETS2P15036 469 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 ZNF17P17021 662 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 SHC1P29353 583 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 OR1E2P47887 323 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 CRYBA2P53672 197 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 CARD18P57730 90 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 KCNJ10P78508 379 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 ELF3P78545 371 aaPredicted RBP5.56□□□□□ -1.52
VIM-207ENST00000495528 BSPH1Q075Z2 132 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 KRTAP24-1Q3LI83 254 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 GLIPR1L2Q4G1C9 344 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 KLHL26Q53HC5 615 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 C6orf52Q5T4I8 152 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 PRAMEF8Q5VWM4 474 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 PRAMEF7Q5VXH5 474 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 HBMQ6B0K9 141 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 LCN8Q6JVE9 175 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 WDR73Q6P4I2 378 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 TFAP2EQ6VUC0 442 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 EIF3MQ7L2H7 374 aaKnown RBP5.56□□□□□ -1.52
VIM-207ENST00000495528 VTCN1Q7Z7D3 282 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 AQP12AQ8IXF9 295 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 GTPBP8Q8N3Z3 284 aaPredicted RBP5.56□□□□□ -1.52
VIM-207ENST00000495528 GATSQ8NAP1 163 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 TMEM116Q8NCL8 245 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 ABHD3Q8WU67 409 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 CANT1Q8WVQ1 401 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 LZICQ8WZA0 190 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 HSD17B8Q92506 261 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 RSRC1Q96IZ7 334 aaKnown RBP5.56□□□□□ -1.52
VIM-207ENST00000495528 RNF145Q96MT1 663 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 WDFY2Q96P53 400 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 FAM110AQ9BQ89 295 aa5.56□□□□□ -1.52
VIM-207ENST00000495528 RHNO1Q9BSD3 238 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms