RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, human

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-222	ENST00000495522	VCAN	P13611	3396 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522		G3V3Q6	166 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	PYCARD-AS1	I3L0S3	204 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	AKAIN1	P0CW23	69 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	GTF2F2	P13984	249 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	GPR85	P60893	370 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	MYBPH	Q13203	477 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	TSSK4	Q6SA08	328 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	MAFA	Q8NHW3	353 aa	Predicted RBP	13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	POC1B	Q8TC44	478 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	NKX3-1	Q99801	234 aa	Predicted RBP	13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	GINS4	Q9BRT9	223 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	CENPM	Q9NSP4	180 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	B3GNT2	Q9NY97	397 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	KLHL13	Q9P2N7	655 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	ASCC3	Q8N3C0	2202 aa	Known RBP	13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	SULT1C2	O00338	296 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	DOK2	O60496	412 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	ZNF81	P51508	661 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	MMP16	P51512	607 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	ACTB	P60709	375 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	ACTG1	P63261	375 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	LCN10	Q6JVE6	187 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	CORO6	Q6QEF8	472 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	ADGRE4P	Q86SQ3	457 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	ADPRHL1	Q8NDY3	354 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	ZNF680	Q8NEM1	530 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	OR51A2	Q8NGJ7	313 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	GPX8	Q8TED1	209 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	C11orf40	Q8WZ69	217 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	SORCS2	Q96PQ0	1159 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	EMC6	Q9BV81	110 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	HEXA-AS1	Q9H8Q6	139 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	APMAP	Q9HDC9	416 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	B3GAT1	Q9P2W7	334 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	PISD	Q9UG56	409 aa		13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	MRPS18B	Q9Y676	258 aa	Known RBP	13.69	□□□□□ -0.22
CALD1-222	ENST00000495522	SPEG	Q15772	3267 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	DCDC2B	A2VCK2	349 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	EIF1AY	O14602	144 aa	Known RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	CYC1	P08574	325 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	GIP	P09681	153 aa	Predicted RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	GABRA1	P14867	456 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	PSMA6	P60900	246 aa	Known RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	TAGLN	Q01995	201 aa	Known RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	SPOCK1	Q08629	439 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	HLA-B	Q31612	363 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	C3orf33	Q6P1S2	294 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	UEVLD	Q8IX04	471 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	JAGN1	Q8N5M9	183 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	NKAIN3	Q8N8D7	197 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	OR4D10	Q8NGI6	311 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	OR6N1	Q8NGY5	312 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	NAT6	Q93015	286 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	DEFB126	Q9BYW3	111 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	CHIA	Q9BZP6	476 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	B3GALT1	Q9Y5Z6	326 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	KIF26B	Q2KJY2	2108 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	MEIS3P1	A6NDR6	274 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	P2RY10	O00398	339 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	NOS1AP	O75052	506 aa	Predicted RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	SLC22A5	O76082	557 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	TOX	O94900	526 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	THEM4	Q5T1C6	240 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	KLHL24	Q6TFL4	600 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	FAM198B	Q6UWH4	519 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	NHLRC1	Q6VVB1	395 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	FAM109A	Q8N4B1	249 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	CLEC1A	Q8NC01	280 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	SLAMF6	Q96DU3	332 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	SPACA9	Q96E40	222 aa	Predicted RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	MRPL13	Q9BYD1	178 aa	Known RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	C12orf4	Q9NQ89	552 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	FSCN3	Q9NQT6	498 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	CA10	Q9NS85	328 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522	CYB5R1	Q9UHQ9	305 aa		13.68	□□□□□ -0.22
CALD1-222	ENST00000495522		A0A0A6YYH2	397 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	LOC390937	A0A1W2PQ73	354 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	UBE2QL1	A1L167	161 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522		A6NJ64	397 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	MEN1	O00255	615 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	LDLRAD4	O15165	306 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	LPL	P06858	475 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	VSIG10L2	P0DP72	767 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	LAP3	P28838	519 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	RAP2B	P61225	183 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	C1orf100	Q5SVJ3	147 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	PMS2CL	Q68D20	193 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	MRPL14	Q6P1L8	145 aa	Known RBP	13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	ZNF627	Q7L945	461 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	SLC36A1	Q7Z2H8	476 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	FTMT	Q8N4E7	242 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	OR2M3	Q8NG83	312 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	OR51S1	Q8NGJ8	323 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	CITED4	Q96RK1	184 aa		13.67	□□□□□ -0.22
CALD1-222	ENST00000495522	RASL10B	Q96S79	203 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms