RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 ZNF860A6NHJ4 632 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 ARPC3O15145 178 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 SLC31A2O15432 143 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 RPS10P46783 165 aaKnown RBP10.53□□□□□ -0.72
HDAC4-210ENST00000493582 RAB28P51157 221 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 TEX30Q5JUR7 227 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 NSUN5P2Q63ZY6 315 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 BEND4Q6ZU67 534 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 TRAPPC6BQ86SZ2 158 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 RBM18Q96H35 190 aaKnown RBP10.53□□□□□ -0.72
HDAC4-210ENST00000493582 MESP1Q9BRJ9 268 aa10.53□□□□□ -0.72
HDAC4-210ENST00000493582 GAR1Q9NY12 217 aaKnown RBP10.53□□□□□ -0.72
HDAC4-210ENST00000493582 C19orf53Q9UNZ5 99 aaPredicted RBP10.53□□□□□ -0.72
HDAC4-210ENST00000493582 TBC1D3DA0A087WVF3 549 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TBC1D3IA0A087WXS9 549 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TBC1D3LB9A6J9 549 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TERTO14746 1132 aaKnown RBP10.52□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF432O94892 652 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TBC1D3HP0C7X1 549 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 CPMP14384 443 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 PI3P19957 117 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 CDX1P47902 265 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-210ENST00000493582 ARRB1P49407 418 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-210ENST00000493582 RBP2P50120 134 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 SQSTM1Q13501 440 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 RAB32Q13637 225 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 FAM53BQ14153 422 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 MEF2DQ14814 521 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF239Q16600 458 aaKnown RBP10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TBC1D3CQ6IPX1 549 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 SLC35D2Q76EJ3 337 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 CDC20BQ86Y33 519 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TBC1D3Q8IZP1 549 aaPredicted RBP10.52□□□□□ -0.73
HDAC4-210ENST00000493582 JAGN1Q8N5M9 183 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 CD300LFQ8TDQ1 290 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 RNF128Q8TEB7 428 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 ARRDC3Q96B67 414 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 C4orf45Q96LM5 186 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 DCBLD2Q96PD2 775 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 LMAN2LQ9H0V9 348 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 GFOD1Q9NXC2 390 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 DNAJB12Q9NXW2 375 aaKnown RBP10.52□□□□□ -0.73
HDAC4-210ENST00000493582 GSKIPQ9P0R6 139 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 EFEMP2O95967 443 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 PNPP00491 289 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 IFNA17P01571 189 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 ALOX5APP20292 161 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 SSX2Q16385 188 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TMEM225Q6GV28 225 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 ULK3Q6PHR2 472 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 LINC00114Q6XXX2 140 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 C10orf53Q8N6V4 93 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 CHST4Q8NCG5 386 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 OR2L3Q8NG85 312 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 OR4N2Q8NGD1 307 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 ST7LQ8TDW4 575 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 SOCS4Q8WXH5 440 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 OR5B2Q96R09 309 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TRIM2Q9C040 744 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 EIF5A2Q9GZV4 153 aaKnown RBP10.52□□□□□ -0.73
HDAC4-210ENST00000493582 TAS2R4Q9NYW5 299 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 MAFFQ9ULX9 164 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 C5orf42Q9H799 3197 aa10.52□□□□□ -0.73
HDAC4-210ENST00000493582 PCCBP05166 539 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CX3CR1P49238 355 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SULT1A2P50226 295 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 TAS2R60P59551 318 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CYCSP99999 105 aaKnown RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SPOCK1Q08629 439 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 GAMTQ14353 236 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CYB5R2Q6BCY4 276 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 FCRL6Q6DN72 434 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 AWAT2Q6E213 333 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 PRSS54Q6PEW0 395 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 RTN4RL2Q86UN3 420 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 TCEAL8Q8IYN2 117 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 RAB42Q8N4Z0 105 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 ZDHHC22Q8N966 263 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 OR56B1Q8NGI3 324 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 OR10C1Q96KK4 312 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 DUSP22Q9NRW4 184 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SLC2A8Q9NY64 477 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 DOK5Q9P104 306 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 PLGP00747 810 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CASP6P55212 293 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 S100A10P60903 97 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 RASGEF1BQ0VAM2 473 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 RUNX2Q13950 521 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SURF2Q15527 256 aaPredicted RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 OR2A2Q6IF42 318 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CSNK1A1LQ8N752 337 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CDRT4Q8N9R6 151 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 CA5BP1Q8WTZ4 195 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 MAFIPQ8WZ33 124 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 FAM46BQ96A09 425 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 DNAJA3Q96EY1 480 aa10.51□□□□□ -0.73
HDAC4-210ENST00000493582 RBM14Q96PK6 669 aaKnown RBP10.51□□□□□ -0.73
HDAC4-210ENST00000493582 SSX3Q99909 188 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms