RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 HCN1O60741 890 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 KERAO60938 352 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 TRIM3O75382 744 aaPredicted RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 EEDO75530 441 aaKnown RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 GPR75O95800 540 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 GBAP04062 536 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 CLPSP04118 112 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 P04436 131 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 C2P06681 752 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 GSTA2P09210 222 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SLC35E2BP0CK96 405 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SLC35E2P0CK97 266 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 STMN1P16949 149 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 TNNI3P19429 210 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 CPN2P22792 545 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PTAFRP25105 342 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SRD5A2P31213 254 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PI4KAP42356 2102 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SSR2P43308 183 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 MAGEA4P43358 317 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 MAGEA5P43359 124 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 DNASE1L1P49184 302 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 NPY4RP50391 375 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 ARFIP1P53367 373 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 RAD23AP54725 363 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PLTPP55058 493 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 RAB10P61026 200 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PLGLB1Q02325 96 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 FOLH1Q04609 750 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 FUT7Q11130 342 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SLAMF1Q13291 335 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 BIKQ13323 160 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 FAM83EQ2M2I3 478 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SLC25A35Q3KQZ1 300 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 KBTBD12Q3ZCT8 623 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PAGE2BQ5JRK9 111 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 RIPPLY2Q5TAB7 128 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SLC22A10Q63ZE4 541 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 MED27Q6P2C8 311 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 OPN5Q6U736 354 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 FAM47EQ6ZV65 393 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 FRA10AC1Q70Z53 315 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 LRRC70Q7Z2Q7 622 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 CMC1Q7Z7K0 106 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 MEX3DQ86XN8 651 aaKnown RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 CTAGE3PQ8IX95 158 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 C9orf40Q8IXQ3 194 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 ST13P4Q8IZP2 240 aaPredicted RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 CENPLQ8N0S6 344 aaPredicted RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 CEND1Q8N111 149 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 LRRC25Q8N386 305 aaPredicted RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 FBXW8Q8N3Y1 598 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 ZNF561Q8N587 486 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 TEX9Q8N6V9 391 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 LSMEM1Q8N8F7 131 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SMYD1Q8NB12 490 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 Q8NFD4 153 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 OR13C5Q8NGS8 318 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 RHEBL1Q8TAI7 183 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 NEIL3Q8TAT5 605 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 FBXO25Q8TCJ0 367 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 DOK4Q8TEW6 326 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 KCTD4Q8WVF5 259 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 CDKL2Q92772 493 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 RIT1Q92963 219 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 UCN3Q969E3 161 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 BPIFA2Q96DR5 249 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 CMTM7Q96FZ5 175 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 BSCL2Q96G97 398 aaPredicted RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 RBBP8Q99708 897 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PAIP2Q9BPZ3 127 aaKnown RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 ZNF717Q9BY31 904 aaPredicted RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 DPH5Q9H2P9 285 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 IKZF5Q9H5V7 419 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 RPF2Q9H7B2 306 aaKnown RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 COPS7BQ9H9Q2 264 aaPredicted RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 CXorf21Q9HAI6 301 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 GRPEL1Q9HAV7 217 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PNPLA3Q9NST1 481 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 CHCHD3Q9NX63 227 aaKnown RBP2.31□□□□□ -2.04
PHC3-213ENST00000491258 MS4A12Q9NXJ0 267 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 SPRR3Q9UBC9 169 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 OPTCQ9UBM4 332 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 KCNN3Q9UGI6 736 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PYCARDQ9ULZ3 195 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 ACOT9Q9Y305 439 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 PLXNA2O75051 1894 aa2.31□□□□□ -2.04
PHC3-213ENST00000491258 DENND4CQ5VZ89 1909 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ZNF638Q14966 1978 aaKnown RBP2.3□□□□□ -2.04
PHC3-213ENST00000491258 MTORP42345 2549 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 VWFP04275 2813 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 OTOGQ6ZRI0 2925 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 TRGV5A0A0B4J1U4 118 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SYCE1LA8MT33 242 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 ZNF724A8MTY0 619 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SUPT3HB4E1H0 165 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 TRIM49D1C9J1S8 452 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 OR7A17O14581 309 aa2.3□□□□□ -2.04
PHC3-213ENST00000491258 SUPT3HO75486 399 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms