RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 VNN3Q9NY84 501 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 TAS2R1Q9NYW7 299 aa21.28■■□□□ 1
HMGN1-217ENST00000489072 ZSCAN5BA6NJL1 495 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 H3BSA7 217 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 RER1O15258 196 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 IGHV1-46P01743 117 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 MT-ND5P03915 603 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 CENPAP49450 140 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 ARHGDIAP52565 204 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 DNM1P34Q6PK57 102 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 ARL9Q6T311 187 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.27■■□□□ 1
HMGN1-217ENST00000489072 OR1F12Q8NHA8 337 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 CLDND2Q8NHS1 167 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 C1orf159Q96HA4 380 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 BEX2Q9BXY8 128 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 SHARPINQ9H0F6 387 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 FN3KQ9H479 309 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 NARFLQ9H6Q4 476 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 RPRD1BQ9NQG5 326 aaKnown RBP21.27■■□□□ 1
HMGN1-217ENST00000489072 TBCCD1Q9NVR7 557 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 PRPF19Q9UMS4 504 aaKnown RBP21.27■■□□□ 1
HMGN1-217ENST00000489072 GRIP1Q9Y3R0 1128 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 LHFPL6Q9Y693 200 aa21.27■■□□□ 1
HMGN1-217ENST00000489072 OR6C68A6NDL8 312 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 PPIHO43447 177 aaKnown RBP21.26■□□□□ 0.99
HMGN1-217ENST00000489072 SPRY3O43610 288 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 RENP00797 406 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 FAM157CP0CG43 387 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 CRYBB2P43320 205 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 HIST1H3AP68431 136 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 CLEC12AQ5QGZ9 265 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 SLC35F1Q5T1Q4 408 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 HIST2H3PS2Q5TEC6 136 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 IL17RELQ6ZVW7 336 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 HIST2H3AQ71DI3 136 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 SDR9C7Q8NEX9 313 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 LPAR3Q9UBY5 353 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 KLHL21Q9UJP4 597 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 POLR1DQ9Y2S0 133 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 STARD10Q9Y365 291 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 CACNG2Q9Y698 323 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 CDH10Q9Y6N8 788 aa21.26■□□□□ 0.99
HMGN1-217ENST00000489072 IDH3BO43837 385 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 GASTP01350 101 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 TFP02787 698 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 DBHP09172 617 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 NOS3P29474 1203 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 CDH15P55291 814 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 PSG7Q13046 419 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 FAM120AOSQ5T036 256 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 CORO6Q6QEF8 472 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 USP51Q70EK9 711 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 ZBTB46Q86UZ6 589 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 LINC00471Q8N535 108 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 LINC01356Q8N9X3 169 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 NPEPL1Q8NDH3 523 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 SLC26A10Q8NG04 563 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 OR8D4Q8NGM9 314 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 CCDC124Q96CT7 223 aaKnown RBP21.25■□□□□ 0.99
HMGN1-217ENST00000489072 PLA2G12AQ9BZM1 189 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 C1orf21Q9H246 121 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 SAP30LQ9HAJ7 183 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 DECR2Q9NUI1 292 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 TANC2Q9HCD6 1990 aa21.25■□□□□ 0.99
HMGN1-217ENST00000489072 IGHV1-69-2A0A0G2JMI3 117 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 PLSCR5A0PG75 271 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 BHLHE40O14503 412 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 TPD52L2O43399 206 aaKnown RBP21.24■□□□□ 0.99
HMGN1-217ENST00000489072 CCNB2O95067 398 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 FAM209AQ5JX71 171 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 OR2T5Q6IEZ7 315 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 PGM2L1Q6PCE3 622 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 OR52E2Q8NGJ4 325 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 OR2T29Q8NH02 315 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 ASB9Q96DX5 294 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 MSL2Q9HCI7 577 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 ATPIF1Q9UII2 106 aa21.24■□□□□ 0.99
HMGN1-217ENST00000489072 ACOT8O14734 319 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 ADH4P08319 380 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.23■□□□□ 0.99
HMGN1-217ENST00000489072 COX10Q12887 443 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 FAM98BQ52LJ0 330 aaKnown RBP21.23■□□□□ 0.99
HMGN1-217ENST00000489072 SPRNQ5BIV9 151 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 AQP11Q8NBQ7 271 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 DDOQ99489 341 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 CYSLTR2Q9NS75 346 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 IL20Q9NYY1 176 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 U3KQV3 271 aa21.23■□□□□ 0.99
HMGN1-217ENST00000489072 TIMM8AO60220 97 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-217ENST00000489072 IFNA2P01563 188 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 GSTM3P21266 225 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 TEKQ02763 1124 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 CR1LQ2VPA4 569 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 AVPI1Q5T686 147 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 RPL13AP3Q6NVV1 102 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 RASSF6Q6ZTQ3 369 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 LINC00346Q8IVM7 164 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 GJC3Q8NFK1 279 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 OR52L1Q8NGH7 329 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms