RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 ZNF426Q9BUY5 554 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 INIPQ9NRY2 104 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 VPREB3Q9UKI3 123 aa12.59□□□□□ -0.39
NME1-208ENST00000487481 DNAH9Q9NYC9 4486 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 NPIPB13A6NJU9 1138 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 CPSF4LA6NMK7 179 aaKnown RBP12.58□□□□□ -0.4
NME1-208ENST00000487481 NPIPB4C9JG80 1138 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 M0R3H8 397 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 LYPD3O95274 346 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 RAC2P15153 192 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 PSMB10P40306 273 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 ERFP50548 548 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 OXLD1Q5BKU9 147 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 ENTPD8Q5MY95 495 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 FAM201AQ5SY85 155 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 SYT9Q86SS6 491 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 MOGAT3Q86VF5 341 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 PNLDC1Q8NA58 520 aaKnown RBP12.58□□□□□ -0.4
NME1-208ENST00000487481 OR13G1Q8NGZ3 307 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 ADAMTS16Q8TE57 1224 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 HDAC2Q92769 488 aaKnown RBP12.58□□□□□ -0.4
NME1-208ENST00000487481 LHX4Q969G2 390 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 MPP4Q96JB8 637 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 WDR55Q9H6Y2 383 aaPredicted RBP12.58□□□□□ -0.4
NME1-208ENST00000487481 SDR39U1Q9NRG7 319 aaPredicted RBP12.58□□□□□ -0.4
NME1-208ENST00000487481 FBLN5Q9UBX5 448 aa12.58□□□□□ -0.4
NME1-208ENST00000487481 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 THY1P04216 161 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 VIMP08670 466 aaKnown RBP12.57□□□□□ -0.4
NME1-208ENST00000487481 IRF2P14316 349 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 SLC6A2P23975 617 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 AQP1P29972 269 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 GUCA1AP43080 201 aaPredicted RBP12.57□□□□□ -0.4
NME1-208ENST00000487481 HTR5AP47898 357 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 POLR2JP52435 117 aaKnown RBP12.57□□□□□ -0.4
NME1-208ENST00000487481 DBPQ10586 325 aaPredicted RBP12.57□□□□□ -0.4
NME1-208ENST00000487481 SCARB2Q14108 478 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 ENDOGQ14249 297 aaKnown RBP12.57□□□□□ -0.4
NME1-208ENST00000487481 C11orf87Q6NUJ2 197 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 FOXL2NBQ6ZUU3 175 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 OR5AS1Q8N127 324 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 OR6T1Q8NGN1 323 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 PTP4A1Q93096 173 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 SIRPDQ9H106 197 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 TMEM38AQ9H6F2 299 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 SLC7A7Q9UM01 511 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 STARD10Q9Y365 291 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 FAM96BQ9Y3D0 163 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 USH1CQ9Y6N9 552 aa12.57□□□□□ -0.4
NME1-208ENST00000487481 TRAPPC13A5PLN9 417 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 TRPC5OSA6NMA1 111 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 HDAC3O15379 428 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 FBP1P09467 338 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 MSR1P21757 451 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 BGNP21810 368 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 PPIBP23284 216 aaKnown RBP12.56□□□□□ -0.4
NME1-208ENST00000487481 GABRA5P31644 462 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 AQP2P41181 271 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 IFFO1Q0D2I5 559 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 COX10Q12887 443 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 STX3Q13277 289 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 NPTX1Q15818 432 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 C11orf88Q6PI97 169 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 SLC2A7Q6PXP3 512 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 C10orf111Q8N326 155 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 SMYD1Q8NB12 490 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 OR8G5Q8NG78 346 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 OR9I1Q8NGQ6 314 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 FNDC8Q8TC99 324 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 CFHR4Q92496 578 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 PHF21AQ96BD5 680 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 WACQ9BTA9 647 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 ALG12Q9BV10 488 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 MEPEQ9NQ76 525 aaPredicted RBP12.56□□□□□ -0.4
NME1-208ENST00000487481 SLC25A37Q9NYZ2 338 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 ZNRD1Q9P1U0 126 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 ERVK-18Q9QC07 812 aa12.56□□□□□ -0.4
NME1-208ENST00000487481 CAB39Q9Y376 341 aaPredicted RBP12.56□□□□□ -0.4
NME1-208ENST00000487481 IGHV3-64DA0A0J9YX35 117 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 J3QW42 95 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 DOK2O60496 412 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 PMELP40967 661 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 GATA4P43694 442 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 NXNQ6DKJ4 435 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 SLC30A8Q8IWU4 369 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 RBP7Q96R05 134 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 ROPN1BQ9BZX4 212 aaPredicted RBP12.55□□□□□ -0.4
NME1-208ENST00000487481 MMADHCQ9H3L0 296 aaPredicted RBP12.55□□□□□ -0.4
NME1-208ENST00000487481 TXNIPQ9H3M7 391 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 ROPN1Q9HAT0 212 aaPredicted RBP12.55□□□□□ -0.4
NME1-208ENST00000487481 CTSZQ9UBR2 303 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 TMCC3Q9ULS5 477 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 ANGPT4Q9Y264 503 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 GMEB1Q9Y692 573 aa12.55□□□□□ -0.4
NME1-208ENST00000487481 A0A1W2PPL8 197 aa12.54□□□□□ -0.4
NME1-208ENST00000487481 ANKRD61A6NGH8 418 aa12.54□□□□□ -0.4
NME1-208ENST00000487481 F5H5P2 479 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms