RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CRNNQ9UBG3 495 aaPredicted RBP15.3■□□□□ 0.04
CHMP3-207ENST00000485465 KLF2Q9Y5W3 355 aaPredicted RBP15.3■□□□□ 0.04
CHMP3-207ENST00000485465 TUBAL3A6NHL2 446 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 PRR32B1ATL7 298 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 C19orf84I3L1E1 186 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 SYNGR3O43761 229 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 DOK2O60496 412 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 IGKV3-15P01624 115 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 SERPINA5P05154 406 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF14P17017 642 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-207ENST00000485465 EEF1B2P24534 225 aaKnown RBP15.29■□□□□ 0.04
CHMP3-207ENST00000485465 C21orf33P30042 268 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-207ENST00000485465 PEX19P40855 299 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 GABARAPL2P60520 117 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 ALKBH2Q6NS38 261 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF322Q6U7Q0 402 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-207ENST00000485465 SEZ6L2Q6UXD5 910 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 SPATC1Q76KD6 591 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 LHFPL3Q86UP9 236 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 WFDC8Q8IUA0 241 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 CPEB3Q8NE35 698 aaKnown RBP15.29■□□□□ 0.04
CHMP3-207ENST00000485465 OR1F12Q8NHA8 337 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF649Q9BS31 505 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 TTTY10Q9BZA0 68 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 HDHD2Q9H0R4 259 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 CENPMQ9NSP4 180 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 ERVK13-1Q9NX77 482 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 FBXL3Q9UKT7 428 aa15.29■□□□□ 0.04
CHMP3-207ENST00000485465 EXOSC1Q9Y3B2 195 aaKnown RBP15.29■□□□□ 0.04
CHMP3-207ENST00000485465 IQCMA0A1B0GVH7 501 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 OR6C6A6NF89 314 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 RGS10O43665 173 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 PTHP01270 115 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 IGLV1-44P01699 117 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 COX5BP10606 129 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 MYL12AP19105 171 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 OPRL1P41146 370 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 ETV1P50549 477 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF83P51522 516 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 IDH3GP51553 393 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-207ENST00000485465 ROM1Q03395 351 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 EGR3Q06889 387 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 ECH1Q13011 328 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 GALEQ14376 348 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 C3orf36Q3SXR2 165 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 KCTD21Q4G0X4 260 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 KCTD18Q6PI47 426 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-207ENST00000485465 RHOUQ7L0Q8 258 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF584Q8IVC4 421 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 OR8B4Q96RC9 309 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 NR1H4Q96RI1 486 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-207ENST00000485465 SIGLEC11Q96RL6 698 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 COQ7Q99807 217 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 ATF6BQ99941 703 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 DDX28Q9NUL7 540 aaKnown RBP15.28■□□□□ 0.04
CHMP3-207ENST00000485465 CHCHD3Q9NX63 227 aaKnown RBP15.28■□□□□ 0.04
CHMP3-207ENST00000485465 SLCO1C1Q9NYB5 712 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 NPAP1Q9NZP6 1156 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 MYO18BQ8IUG5 2567 aa15.28■□□□□ 0.04
CHMP3-207ENST00000485465 HCFC1P51610 2035 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 FLNCQ14315 2725 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 IGHV1-18A0A0C4DH31 117 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF878C9JN71 531 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 PSMD9O00233 223 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 MAGEB4O15481 346 aaPredicted RBP15.27■□□□□ 0.04
CHMP3-207ENST00000485465 TNFAIP8O95379 198 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 CELA3BP08861 270 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 H2BFMP0C1H6 154 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 LIMS3P0CW19 117 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 LIMS4P0CW20 117 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 IGFBP2P18065 325 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 APEX1P27695 318 aaKnown RBP15.27■□□□□ 0.04
CHMP3-207ENST00000485465 HTR5AP47898 357 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 TAF13Q15543 124 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF684Q5T5D7 378 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 RNLSQ5VYX0 342 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 DEGS2Q6QHC5 323 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 LRRN1Q6UXK5 716 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 PRSS48Q7RTY5 328 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 KRT77Q7Z794 578 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 ZNF679Q8IYX0 411 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 SNX33Q8WV41 574 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 MRPL48Q96GC5 212 aaKnown RBP15.27■□□□□ 0.04
CHMP3-207ENST00000485465 MS4A3Q96HJ5 214 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 DACH2Q96NX9 599 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 MYCBPQ99417 103 aaPredicted RBP15.27■□□□□ 0.04
CHMP3-207ENST00000485465 ALG8Q9BVK2 526 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 CDCA4Q9BXL8 241 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 CLEC2DQ9UHP7 191 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 ATPIF1Q9UII2 106 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 IKZF2Q9UKS7 526 aa15.27■□□□□ 0.04
CHMP3-207ENST00000485465 LOC100509620A0A075B734 347 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 TRIM64A6NGJ6 449 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 METTL15A6NJ78 407 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 M0R1B8 84 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 MRPS14O60783 128 aaKnown RBP15.26■□□□□ 0.03
CHMP3-207ENST00000485465 ZNF254O75437 659 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 MT-ND2P03891 347 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 HTR1AP08908 422 aa15.26■□□□□ 0.03
CHMP3-207ENST00000485465 STOMP27105 288 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms