RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ZNF414Q96IQ9 312 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 HES7Q9BYE0 225 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 ELOVL6Q9H5J4 265 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 RANBP3Q9H6Z4 567 aaPredicted RBP4.66□□□□□ -1.66
UBR3-210ENST00000484596 SYNDIG1Q9H7V2 258 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 UGT1A10Q9HAW8 530 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 PLGRKTQ9HBL7 147 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 MRPS30Q9NP92 439 aaKnown RBP4.66□□□□□ -1.66
UBR3-210ENST00000484596 CCNB1IP1Q9NPC3 277 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 CALYQ9NYX4 217 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 CELA1Q9UNI1 258 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 COMMD3-BMI1R4GMX3 469 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 CEP290O15078 2479 aa4.66□□□□□ -1.66
UBR3-210ENST00000484596 RAI1Q7Z5J4 1906 aaPredicted RBP4.66□□□□□ -1.66
UBR3-210ENST00000484596 NDUFS8O00217 210 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 CHST1O43916 411 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 DCKP27707 260 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 SLC1A1P43005 524 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 NPBWR2P48146 333 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 CX3CR1P49238 355 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 PAX5Q02548 391 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 ACVR1Q04771 509 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 SELENBP1Q13228 472 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 ARFRP1Q13795 201 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 KLHL40Q2TBA0 621 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 PPM1LQ5SGD2 360 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 GPR157Q5UAW9 335 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 MMAAQ8IVH4 418 aaKnown RBP4.65□□□□□ -1.67
UBR3-210ENST00000484596 RHEBL1Q8TAI7 183 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 GLYATL2Q8WU03 294 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 SGK3Q96BR1 496 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 C8orf44Q96CB5 159 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 PRRC1Q96M27 445 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 RARRES2Q99969 163 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 TMEM246Q9BRR3 403 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 RIOK2Q9BVS4 552 aaKnown RBP4.65□□□□□ -1.67
UBR3-210ENST00000484596 SAMSN1Q9NSI8 373 aaKnown RBP4.65□□□□□ -1.67
UBR3-210ENST00000484596 EXD2Q9NVH0 621 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 STK38LQ9Y2H1 464 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 C15orf41Q9Y2V0 281 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 KIAA0100Q14667 2235 aaKnown RBP4.65□□□□□ -1.67
UBR3-210ENST00000484596 PHIPQ8WWQ0 1821 aa4.65□□□□□ -1.67
UBR3-210ENST00000484596 CDK5RAP2Q96SN8 1893 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 KIR2DL5BA0A0G2JN68 375 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 KIR2DL5BA0A0G2JPC4 375 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 C12orf77C9JDV5 145 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 HUS1O60921 280 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 TIMP1P01033 207 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 ZNF19P17023 458 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 GABRR1P24046 479 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 COX7A1P24310 79 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 LONP1P36776 959 aaKnown RBP4.64□□□□□ -1.67
UBR3-210ENST00000484596 CDKN1BP46527 198 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 UGT2B15P54855 530 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 TAS2R19P59542 299 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 ORC2Q13416 577 aaPredicted RBP4.64□□□□□ -1.67
UBR3-210ENST00000484596 SOHLH1Q5JUK2 328 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 PLCXD3Q63HM9 321 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 ZNF620Q6ZNG0 422 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 COPS6Q7L5N1 327 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 CD302Q8IX05 232 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 SLC7A5P1Q8MH63 180 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 IQCKQ8N0W5 287 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 KIR2DL5AQ8N109 375 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 PDIK1LQ8N165 341 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 ZNF740Q8NDX6 193 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 KIR2DL5BQ8NHK3 375 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 MARCH1Q8TCQ1 289 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 CXorf40AQ8TE69 158 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 ZIM3Q96PE6 472 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 ANKRD60Q9BZ19 345 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 NEUROG2Q9H2A3 272 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 CWH43Q9H720 699 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 AGPAT3Q9NRZ7 376 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 AHSPQ9NZD4 102 aa4.64□□□□□ -1.67
UBR3-210ENST00000484596 UXTQ9UBK9 157 aaPredicted RBP4.64□□□□□ -1.67
UBR3-210ENST00000484596 PEF1Q9UBV8 284 aaKnown RBP4.64□□□□□ -1.67
UBR3-210ENST00000484596 TRBV9A0A0B4J1U6 114 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 LOC100653049A0A140TA62 436 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 OR6C74A6NCV1 312 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 F8VZ95 297 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 CDC7O00311 574 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 NDUFAB1O14561 156 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 EEDO75530 441 aaKnown RBP4.63□□□□□ -1.67
UBR3-210ENST00000484596 KRT34O76011 436 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 CLIC3O95833 236 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 S100A6P06703 90 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 UBTFL6P0CB48 400 aaPredicted RBP4.63□□□□□ -1.67
UBR3-210ENST00000484596 HPGDP15428 266 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 ZNF3P17036 446 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 BCKDHBP21953 392 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 FMO3P31513 532 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 MRPL19P49406 292 aaKnown RBP4.63□□□□□ -1.67
UBR3-210ENST00000484596 SSR4P51571 173 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 PLTPP55058 493 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 CYTH1Q15438 398 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 HSDL1Q3SXM5 330 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 HIKESHIQ53FT3 197 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 LCE3AQ5TA76 89 aa4.63□□□□□ -1.67
UBR3-210ENST00000484596 AGBL2Q5U5Z8 902 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms