RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 BZW1Q7L1Q6 419 aaKnown RBP3.28□□□□□ -1.88
SF3B1-210ENST00000482158 ABHD12BQ7Z5M8 362 aaPredicted RBP3.28□□□□□ -1.88
SF3B1-210ENST00000482158 CMC1Q7Z7K0 106 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 OR2L8Q8NGY9 312 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 CT45A3Q8NHU0 189 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 C15orf40Q8WUR7 153 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 FRZBQ92765 325 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 EEF1AKMT3Q96AZ1 226 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 ANKRD60Q9BZ19 345 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 SPNS1Q9H2V7 528 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 HMG20AQ9NP66 347 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 ZNRD1Q9P1U0 126 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 DUX4Q9UBX2 424 aa3.28□□□□□ -1.88
SF3B1-210ENST00000482158 A0A0U1RQV1 116 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 NCBP2LA6PVI3 153 aaKnown RBP3.27□□□□□ -1.89
SF3B1-210ENST00000482158 HUS1O60921 280 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 EIF4EP06730 217 aaKnown RBP3.27□□□□□ -1.89
SF3B1-210ENST00000482158 CD3GP09693 182 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 MYL2P10916 166 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 GGT1P19440 569 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 OR1E1P30953 314 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 ILKQ13418 452 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 TRAM2Q15035 370 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 C5orf47Q569G3 176 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 PRMT9Q6P2P2 845 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 NPSR1Q6W5P4 371 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 H1FOOQ8IZA3 346 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-210ENST00000482158 CCDC148Q8NFR7 591 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 C8orf44Q96CB5 159 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 ECHDC3Q96DC8 303 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 MICU1Q9BPX6 476 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 FAM49BQ9NUQ9 324 aa3.27□□□□□ -1.89
SF3B1-210ENST00000482158 TSSC4Q9Y5U2 329 aaPredicted RBP3.27□□□□□ -1.89
SF3B1-210ENST00000482158 TUBGCP6Q96RT7 1819 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 GAKO14976 1311 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 L7N2F9 121 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 B4GALT5O43286 388 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 FLOT1O75955 427 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 CD160O95971 181 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 ARG1P05089 322 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 ADRA2AP08913 450 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 WARSP23381 471 aaKnown RBP3.26□□□□□ -1.89
SF3B1-210ENST00000482158 STOMP27105 288 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 PMELP40967 661 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 GBE1Q04446 702 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 MERTKQ12866 999 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 ABCA11PQ4W5N1 156 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 ZNF684Q5T5D7 378 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 NANOGP8Q6NSW7 305 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 CENPQQ7L2Z9 268 aaPredicted RBP3.26□□□□□ -1.89
SF3B1-210ENST00000482158 LUZP2Q86TE4 346 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 CBLN2Q8IUK8 224 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 PQLC3Q8N755 202 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 C11orf72Q8NBR9 251 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 TSEN15Q8WW01 171 aaKnown RBP3.26□□□□□ -1.89
SF3B1-210ENST00000482158 PRRC1Q96M27 445 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 WFDC1Q9HC57 220 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 ZDHHC4Q9NPG8 344 aa3.26□□□□□ -1.89
SF3B1-210ENST00000482158 LYARQ9NX58 379 aaKnown RBP3.26□□□□□ -1.89
SF3B1-210ENST00000482158 MUC1P15941 1255 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-210ENST00000482158 UQCRFS1P47985 274 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 MRPL19P49406 292 aaKnown RBP3.25□□□□□ -1.89
SF3B1-210ENST00000482158 SEMG2Q02383 582 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 QPRTQ15274 297 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 IRF4Q15306 451 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 ORMDL2Q53FV1 153 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 UBALD2Q8IYN6 164 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 GABRG1Q8N1C3 465 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 METTL13Q8N6R0 699 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 OR9G4Q8NGQ1 327 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 OR8U1Q8NH10 309 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 OR5K2Q8NHB8 316 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 PIFOQ8TCI5 191 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 ESR2Q92731 530 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 NTAN1Q96AB6 310 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 RBMXL1Q96E39 390 aaKnown RBP3.25□□□□□ -1.89
SF3B1-210ENST00000482158 BPIFA3Q9BQP9 254 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 ACTR3CQ9C0K3 210 aaPredicted RBP3.25□□□□□ -1.89
SF3B1-210ENST00000482158 VPS37BQ9H9H4 285 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 SIRT7Q9NRC8 400 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 CTSFQ9UBX1 484 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 TMEM14AQ9Y6G1 99 aa3.25□□□□□ -1.89
SF3B1-210ENST00000482158 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 SERTM2A0A1B0GWG4 89 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TMEM223A0PJW6 202 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TEX46H3BTG2 121 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 H7C417 338 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 RAD51CO43502 376 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 CTAG2O75638 210 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 YIF1AO95070 293 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 CTSLP07711 333 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 TPM2P07951 284 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 ERCC1P07992 297 aaPredicted RBP3.24□□□□□ -1.89
SF3B1-210ENST00000482158 CTRB1P17538 263 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 SSTR5P35346 364 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 KIR3DL2P43630 455 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 RAB9AP51151 201 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 UBE2NP61088 152 aaKnown RBP3.24□□□□□ -1.89
SF3B1-210ENST00000482158 PSMD5Q16401 504 aa3.24□□□□□ -1.89
SF3B1-210ENST00000482158 XKR4Q5GH76 650 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms